RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SEPT1Q8WYJ6 367 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 ADAM2Q99965 735 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 ZNF577Q9BSK1 485 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 THAP9Q9H5L6 903 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 RNF19AQ9NV58 838 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
HDAC6-215ENST00000465457 GDAQ9Y2T3 454 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 SQORQ9Y6N5 450 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 CACNA1IQ9P0X4 2223 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 CHD8Q9HCK8 2581 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 COL4A3Q01955 1670 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 A0A1B0GTH6 734 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 M0QZ92 97 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
HDAC6-215ENST00000465457 CCNE1P24864 410 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 KRT76Q01546 638 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 VSTM4Q8IW00 320 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 SMYD4Q8IYR2 804 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-215ENST00000465457 GUF1Q8N442 669 aaKnown RBP15.17■□□□□ 0.02
HDAC6-215ENST00000465457 DDX12PQ92771 950 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 CASP10Q92851 521 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 RRAGDQ9NQL2 400 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-215ENST00000465457 TBC1D22BQ9NU19 505 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 KCND2Q9NZV8 630 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 LIMA1Q9UHB6 759 aaKnown RBP15.17■□□□□ 0.02
HDAC6-215ENST00000465457 TCEAL9Q9UHQ7 104 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 LZTS1Q9Y250 596 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 PCDHA2Q9Y5H9 948 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 UBIAD1Q9Y5Z9 338 aa15.17■□□□□ 0.02
HDAC6-215ENST00000465457 DOCK8Q8NF50 2099 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 WDR81Q562E7 1941 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 LRRC10BA6NIK2 292 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 IPO5O00410 1097 aaKnown RBP15.16■□□□□ 0.02
HDAC6-215ENST00000465457 MAFGO15525 162 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 CLASP2O75122 1294 aaKnown RBP15.16■□□□□ 0.02
HDAC6-215ENST00000465457 MED24O75448 989 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 TPM2P07951 284 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 LAG3P18627 525 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 PLCB3Q01970 1234 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 LRRC63Q05C16 580 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 EHHADHQ08426 723 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 EPHA7Q15375 998 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 PDE12Q6L8Q7 609 aaKnown RBP15.16■□□□□ 0.02
HDAC6-215ENST00000465457 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 TMC6Q7Z403 805 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 GPBP1Q86WP2 473 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 CATSPER3Q86XQ3 398 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 DCLK2Q8N568 766 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 DTWD2Q8NBA8 298 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 CCDC112Q8NEF3 446 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 RIN2Q8WYP3 895 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-215ENST00000465457 CDHR1Q96JP9 859 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 NECTIN4Q96NY8 510 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 MED15Q96RN5 788 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 EIF2AK1Q9BQI3 630 aaKnown RBP15.16■□□□□ 0.02
HDAC6-215ENST00000465457 SMARCAD1Q9H4L7 1026 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 JADE2Q9NQC1 790 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 RGS18Q9NS28 235 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 MAGEC2Q9UBF1 373 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-215ENST00000465457 USP24Q9UPU5 2620 aa15.16■□□□□ 0.02
HDAC6-215ENST00000465457 DENND3A2RUS2 1198 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 C2orf71A6NGG8 1288 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 NARSO43776 548 aaKnown RBP15.15■□□□□ 0.02
HDAC6-215ENST00000465457 KRT18P05783 430 aaKnown RBP15.15■□□□□ 0.02
HDAC6-215ENST00000465457 SPATA31C1P0DKV0 1188 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 IDEP14735 1019 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 SFPQP23246 707 aaKnown RBP eCLIP15.15■□□□□ 0.02
HDAC6-215ENST00000465457 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 STX17P56962 302 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 MTMR1Q13613 665 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 SPECC1LQ69YQ0 1117 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 KCNT2Q6UVM3 1135 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 B3GNT9Q6UX72 402 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 TMC7Q7Z402 723 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 KCNK18Q7Z418 384 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 FILIP1Q7Z7B0 1213 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 NLRX1Q86UT6 975 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 LRRC8AQ8IWT6 810 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 ZDHHC14Q8IZN3 488 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 SYT2Q8N9I0 419 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-215ENST00000465457 RDM1Q8NG50 284 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 AUTS2Q8WXX7 1259 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 GPRASP2Q96D09 838 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 CASD1Q96PB1 797 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 TSG101Q99816 390 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 HSD17B14Q9BPX1 270 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 SAMSN1Q9NSI8 373 aaKnown RBP15.15■□□□□ 0.02
HDAC6-215ENST00000465457 ST3GAL5Q9UNP4 418 aa15.15■□□□□ 0.02
HDAC6-215ENST00000465457 FRMD3A2A2Y4 597 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 RRN3P2A6NIE6 340 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 RPS6KA5O75582 802 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 LMNAP02545 664 aaKnown RBP15.14■□□□□ 0.01
HDAC6-215ENST00000465457 SSBP05455 408 aaKnown RBP eCLIP15.14■□□□□ 0.01
HDAC6-215ENST00000465457 EPCAMP16422 314 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 CYP11B2P19099 503 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 ITIH3Q06033 890 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 TRIM14Q14142 442 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 ECM1Q16610 540 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 TCP11X2Q5H9J9 407 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms