RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 SPATA31D3P0C874 917 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 KPNA1P52294 538 aaPredicted RBP6.19□□□□□ -1.42
UBR4-209ENST00000465036 SEC24CP53992 1094 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 GUCY1B3Q02153 619 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 MGAT5Q09328 741 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 TCEA2Q15560 299 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 SPATA31D4Q6ZUB0 917 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 XYLT1Q86Y38 959 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 NXPE1Q8N323 547 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 SMC1BQ8NDV3 1235 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 SLC9A6Q92581 669 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 NELL1Q92832 810 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 KANSL2Q9H9L4 492 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 THG1LQ9NWX6 298 aaKnown RBP6.19□□□□□ -1.42
UBR4-209ENST00000465036 PRSS50Q9UI38 385 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 INSL6Q9Y581 213 aa6.19□□□□□ -1.42
UBR4-209ENST00000465036 TNIKQ9UKE5 1360 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 KIAA0556O60303 1618 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 CTTNBP2Q8WZ74 1663 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 HMGB1P09429 215 aaKnown RBP6.18□□□□□ -1.42
UBR4-209ENST00000465036 CLEC2LP0C7M8 214 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 ATXN1P54253 815 aaKnown RBP6.18□□□□□ -1.42
UBR4-209ENST00000465036 RNASE9P60153 205 aaKnown RBP6.18□□□□□ -1.42
UBR4-209ENST00000465036 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
UBR4-209ENST00000465036 DDB1Q16531 1140 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 ERCC6LQ2NKX8 1250 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 LYSMD2Q8IV50 215 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 OR10H5Q8NGA6 315 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 PAWRQ96IZ0 340 aaKnown RBP6.18□□□□□ -1.42
UBR4-209ENST00000465036 CDC5LQ99459 802 aaKnown RBP6.18□□□□□ -1.42
UBR4-209ENST00000465036 PRDM13Q9H4Q3 707 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 SPON1Q9HCB6 807 aa6.18□□□□□ -1.42
UBR4-209ENST00000465036 EEA1Q15075 1411 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 INO80B-WBP1J3KQ70 363 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 KPNA6O60684 536 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 NEK4P51957 841 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 TERF2Q15554 542 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 BMT2Q1RMZ1 405 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 FAM102AQ5T9C2 384 aaPredicted RBP6.17□□□□□ -1.42
UBR4-209ENST00000465036 ZKSCAN2Q63HK3 967 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 EFCAB12Q6NXP0 572 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 FRMD7Q6ZUT3 714 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 RD3Q7Z3Z2 195 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 LRRTM3Q86VH5 581 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 CPEB3Q8NE35 698 aaKnown RBP6.17□□□□□ -1.42
UBR4-209ENST00000465036 OR14C36Q8NHC7 312 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 SNX33Q8WV41 574 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 DNAJC2Q99543 621 aaKnown RBP6.17□□□□□ -1.42
UBR4-209ENST00000465036 INO80BQ9C086 356 aaPredicted RBP6.17□□□□□ -1.42
UBR4-209ENST00000465036 R3HDMLQ9H3Y0 253 aa6.17□□□□□ -1.42
UBR4-209ENST00000465036 ALG13Q9NP73 1137 aaKnown RBP6.17□□□□□ -1.42
UBR4-209ENST00000465036 EVLQ9UI08 416 aaPredicted RBP6.17□□□□□ -1.42
UBR4-209ENST00000465036 EGR2P11161 476 aaPredicted RBP6.16□□□□□ -1.42
UBR4-209ENST00000465036 DDX6P26196 483 aaKnown RBP eCLIP6.16□□□□□ -1.42
UBR4-209ENST00000465036 LSSP48449 732 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 MANFP55145 182 aaKnown RBP6.16□□□□□ -1.42
UBR4-209ENST00000465036 PPARAQ07869 468 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 FOXI1Q12951 378 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 PDCD4Q53EL6 469 aaKnown RBP6.16□□□□□ -1.42
UBR4-209ENST00000465036 METRNLQ641Q3 311 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 PDZD4Q76G19 769 aaPredicted RBP6.16□□□□□ -1.42
UBR4-209ENST00000465036 CMTR2Q8IYT2 770 aaKnown RBP6.16□□□□□ -1.42
UBR4-209ENST00000465036 NINJ1Q92982 152 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 CAVIN3Q969G5 261 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 ADAM2Q99965 735 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 KCNG1Q9UIX4 513 aa6.16□□□□□ -1.42
UBR4-209ENST00000465036 POLR2AP24928 1970 aaKnown RBP6.16□□□□□ -1.42
UBR4-209ENST00000465036 PLB1Q6P1J6 1458 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 ZNF185O15231 689 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 ESRRBO95718 433 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 ELLP55199 621 aaPredicted RBP6.15□□□□□ -1.42
UBR4-209ENST00000465036 ANKS6Q68DC2 871 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 FBXO42Q6P3S6 717 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 AHI1Q8N157 1196 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 FAM98AQ8NCA5 519 aaKnown RBP6.15□□□□□ -1.42
UBR4-209ENST00000465036 ZFP28Q8NHY6 868 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 PPP2R3BQ9Y5P8 575 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 FPGT-TNNI3KV9GXZ4 949 aa6.15□□□□□ -1.42
UBR4-209ENST00000465036 ZMYM3Q14202 1370 aa6.15□□□□□ -1.43
UBR4-209ENST00000465036 UACAQ9BZF9 1416 aa6.15□□□□□ -1.43
UBR4-209ENST00000465036 KIF21BO75037 1637 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 PJA2O43164 708 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 TMEM127O75204 238 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 ITGA10O75578 1167 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 ZNF37AP17032 561 aaPredicted RBP6.14□□□□□ -1.43
UBR4-209ENST00000465036 CRHR1P34998 444 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 SCNN1BP51168 640 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 PPM1KQ8N3J5 372 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 SIMC1Q8NDZ2 872 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 TFAP2CQ92754 450 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 FUBP1Q96AE4 644 aaKnown RBP6.14□□□□□ -1.43
UBR4-209ENST00000465036 TEX101Q9BY14 249 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 GPRC5DQ9NZD1 345 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 MAST3O60307 1309 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 ABCC2Q92887 1545 aa6.14□□□□□ -1.43
UBR4-209ENST00000465036 KIF13AQ9H1H9 1805 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 KRTAP10-11P60412 298 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 MXRA7P84157 204 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 SART3Q15020 963 aaKnown RBP6.13□□□□□ -1.43
UBR4-209ENST00000465036 ABHD15Q6UXT9 468 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms