RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 ZNF572Q7Z3I7 529 aaPredicted RBP5.87□□□□□ -1.47
PRKD3-206ENST00000464552 AMOTL1Q8IY63 956 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 TRMT2AQ8IZ69 625 aaKnown RBP5.87□□□□□ -1.47
PRKD3-206ENST00000464552 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 DCLRE1CQ96SD1 692 aaKnown RBP5.87□□□□□ -1.47
PRKD3-206ENST00000464552 ADI1Q9BV57 179 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 KCNH6Q9H252 994 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 SLC2A4RGQ9NR83 387 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 GPRC5BQ9NZH0 403 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 SORCS3Q9UPU3 1222 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 GPR45Q9Y5Y3 372 aa5.87□□□□□ -1.47
PRKD3-206ENST00000464552 MRC2Q9UBG0 1479 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 ADCY6O43306 1168 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 ADH4P08319 380 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 OSMP13725 252 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 CDK11BP21127 795 aaKnown RBP5.86□□□□□ -1.47
PRKD3-206ENST00000464552 PTPN7P35236 360 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 MGAT2Q10469 447 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 SP140Q13342 867 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 CSRP2Q16527 193 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 ANKS6Q68DC2 871 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 EFCAB12Q6NXP0 572 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 ZNF276Q8N554 614 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 HAS1Q92839 578 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 LENG9Q96B70 501 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 TRIM8Q9BZR9 551 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 SPON1Q9HCB6 807 aa5.86□□□□□ -1.47
PRKD3-206ENST00000464552 EIF2B4Q9UI10 523 aaKnown RBP5.86□□□□□ -1.47
PRKD3-206ENST00000464552 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
PRKD3-206ENST00000464552 ATRNL1Q5VV63 1379 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 DIRC3C9JPN6 131 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 ENDOD1O94919 500 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 SCAF4O95104 1147 aaKnown RBP5.85□□□□□ -1.47
PRKD3-206ENST00000464552 RBP3P10745 1247 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 GSPT1P15170 499 aaKnown RBP5.85□□□□□ -1.47
PRKD3-206ENST00000464552 ALOX15P16050 662 aaPredicted RBP5.85□□□□□ -1.47
PRKD3-206ENST00000464552 SREBF1P36956 1147 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 AMPD3Q01432 767 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 FHL2Q14192 279 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 RHOUQ7L0Q8 258 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 PQLC1Q8N2U9 271 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 CBARPQ8N350 705 aaPredicted RBP5.85□□□□□ -1.47
PRKD3-206ENST00000464552 REPS2Q8NFH8 660 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 OR10H5Q8NGA6 315 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 ZFP28Q8NHY6 868 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 CPT1CQ8TCG5 803 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 TFAP2CQ92754 450 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 CLIP3Q96DZ5 547 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 UHRF1Q96T88 793 aaPredicted RBP5.85□□□□□ -1.47
PRKD3-206ENST00000464552 MRIQ9BWK5 157 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 SLC46A2Q9BY10 475 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 DMRT3Q9NQL9 472 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 FZD1Q9UP38 647 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 PCDHGA2Q9Y5H1 932 aa5.85□□□□□ -1.47
PRKD3-206ENST00000464552 FANCD2Q9BXW9 1451 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 FAM171A2A8MVW0 826 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 SNRPA1P09661 255 aaKnown RBP5.84□□□□□ -1.47
PRKD3-206ENST00000464552 IL2RBP14784 551 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 APOBEC3AP31941 199 aaPredicted RBP5.84□□□□□ -1.47
PRKD3-206ENST00000464552 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 HMGA2P52926 109 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 PER3P56645 1201 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 CLRN1P58418 232 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 NOMO1Q15155 1222 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 SYDE2Q5VT97 1194 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 MRGPREQ86SM8 312 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 SYT12Q8IV01 421 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 SYNE4Q8N205 404 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 C1orf162Q8NEQ5 155 aaPredicted RBP5.84□□□□□ -1.47
PRKD3-206ENST00000464552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.84□□□□□ -1.47
PRKD3-206ENST00000464552 CASKIN2Q8WXE0 1202 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 LARP4BQ92615 738 aaKnown RBP5.84□□□□□ -1.47
PRKD3-206ENST00000464552 CYFIP2Q96F07 1278 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 FAM193BQ96PV7 902 aaPredicted RBP5.84□□□□□ -1.47
PRKD3-206ENST00000464552 NRDE2Q9H7Z3 1164 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 MOCS1Q9NZB8 636 aa5.84□□□□□ -1.47
PRKD3-206ENST00000464552 ING1Q9UK53 422 aaPredicted RBP5.84□□□□□ -1.47
PRKD3-206ENST00000464552 PRDM2Q13029 1718 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 CXorf49A8MYA2 514 aaPredicted RBP5.83□□□□□ -1.48
PRKD3-206ENST00000464552 AHRRA9YTQ3 701 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 ALG1L2C9J202 215 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 LEFTY2O00292 366 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 ITGB1P05556 798 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 NR4A1P22736 598 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 WASP42768 502 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 CDKN1CP49918 316 aaPredicted RBP5.83□□□□□ -1.48
PRKD3-206ENST00000464552 GUCY2FP51841 1108 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 KRT85P78386 507 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 NHLH2Q02577 135 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 DPTQ07507 201 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 RRP12Q5JTH9 1297 aaKnown RBP5.83□□□□□ -1.48
PRKD3-206ENST00000464552 PGM2L1Q6PCE3 622 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 GDF7Q7Z4P5 450 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 ULK2Q8IYT8 1036 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRKD3-206ENST00000464552 SLC35B2Q8TB61 432 aa5.83□□□□□ -1.48
PRKD3-206ENST00000464552 NEU4Q8WWR8 484 aaPredicted RBP5.83□□□□□ -1.48
PRKD3-206ENST00000464552 PRRX2Q99811 253 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms