RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CRCPO75575 148 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 GRAP2O75791 330 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 SGPL1O95470 568 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 SOX10P56693 466 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 PSMC1P62191 440 aaKnown RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 ZNF667Q5HYK9 610 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 RHOT1Q8IXI2 618 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 CCDC124Q96CT7 223 aaKnown RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 SNF8Q96H20 258 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 TTC1Q99614 292 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 ATP6V0A4Q9HBG4 840 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 SLC40A1Q9NP59 571 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 TBC1D22BQ9NU19 505 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 GOLGA4Q13439 2230 aaKnown RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 NWD1Q149M9 1564 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 PHF2O75151 1096 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 HMGCS2P54868 508 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 ITKQ08881 620 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 DNAJC3Q13217 504 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 KCTD2Q14681 263 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 ZNF699Q32M78 642 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 FAM160B1Q5W0V3 765 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 AADACL2Q6P093 401 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 PACS2Q86VP3 889 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 TTLL6Q8N841 843 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 MCPH1Q8NEM0 835 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 ATXN7L3BQ96GX2 97 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 TOPORSQ9NS56 1045 aaPredicted RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 SLC9A2Q9UBY0 812 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 DIS3Q9Y2L1 958 aaKnown RBP9.65□□□□□ -0.86
HPS4-208ENST00000464362 SCINQ9Y6U3 715 aa9.65□□□□□ -0.86
HPS4-208ENST00000464362 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.87
HPS4-208ENST00000464362 TMEM253P0C7T8 217 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 ALCAMQ13740 583 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 C1orf228Q6PIY5 440 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 SPATA21Q7Z572 469 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 ZFPM1Q8IX07 1006 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 FLAD1Q8NFF5 587 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 ERP27Q96DN0 273 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 MIS12Q9H081 205 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 KCNH7Q9NS40 1196 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 ZFP69BQ9UJL9 534 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 PPP1R9AQ9ULJ8 1098 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 NOD1Q9Y239 953 aa9.65□□□□□ -0.87
HPS4-208ENST00000464362 AFF2P51816 1311 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 COPEO14579 308 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 ITGA8P53708 1063 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 ARL4CP56559 192 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 ZNF568Q3ZCX4 644 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 SH2D4BQ5SQS7 431 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 GSDMBQ8TAX9 411 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 TRIM55Q9BYV6 548 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 TRABDQ9H4I3 376 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 CYP4F11Q9HBI6 524 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 NYAP2Q9P242 653 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 PCDHA10Q9Y5I2 948 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 UBE4BO95155 1302 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 PITPNM2Q9BZ72 1349 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 CALCAP01258 141 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 RALAP11233 206 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 KRT10P13645 584 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 HSPA9P38646 679 aaKnown RBP9.64□□□□□ -0.87
HPS4-208ENST00000464362 RAD23BP54727 409 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 KRT76Q01546 638 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 WDR72Q3MJ13 1102 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 ZNF507Q8TCN5 953 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 NLRP7Q8WX94 980 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 RIOX1Q9H6W3 641 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 SLC38A10Q9HBR0 1119 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 KCNQ5Q9NR82 932 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 SUCLA2Q9P2R7 463 aaPredicted RBP9.64□□□□□ -0.87
HPS4-208ENST00000464362 E2F8A0AVK6 867 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 CCDC78A2IDD5 438 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 TRPA1O75762 1119 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 SYF2O95926 243 aaKnown RBP9.64□□□□□ -0.87
HPS4-208ENST00000464362 SLC4A1P02730 911 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 CNGA1P29973 690 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 FUT2Q10981 343 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 MTMR2Q13614 643 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 MAPK6Q16659 721 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 MEI1Q5TIA1 1274 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 ARHGAP27Q6ZUM4 889 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 OR6B3Q8NGW1 331 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 ATL2Q8NHH9 583 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 CDKL2Q92772 493 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 RBM41Q96IZ5 413 aaKnown RBP9.64□□□□□ -0.87
HPS4-208ENST00000464362 FAM84AQ96KN4 292 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 PRMT6Q96LA8 375 aaPredicted RBP9.64□□□□□ -0.87
HPS4-208ENST00000464362 OSBPL8Q9BZF1 889 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 TUFT1Q9NNX1 390 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 NPHS2Q9NP85 383 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 SSX2IPQ9Y2D8 614 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 KNDC1Q76NI1 1749 aa9.64□□□□□ -0.87
HPS4-208ENST00000464362 FAM86B1E9PN63 330 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 FAM86B2P0C5J1 330 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 JAK3P52333 1124 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 SNX16P57768 344 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 MAPK7Q13164 816 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms