RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SLC37A4O43826 429 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 C8AP07357 584 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 CD72P21854 359 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 PDIA3P30101 505 aaKnown RBP16.09■□□□□ 0.17
SMC1A-204ENST00000463684 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 HSP90AA2PQ14568 343 aaPredicted RBP16.09■□□□□ 0.17
SMC1A-204ENST00000463684 INF2Q27J81 1249 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 KRT25Q7Z3Z0 450 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 DAGLBQ8NCG7 672 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 ZBTB44Q8NCP5 570 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 TTPALQ9BTX7 342 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 PHF20Q9BVI0 1012 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 LTB4R2Q9NPC1 389 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 USP18Q9UMW8 372 aa16.09■□□□□ 0.17
SMC1A-204ENST00000463684 SMG5Q9UPR3 1016 aaKnown RBP16.09■□□□□ 0.17
SMC1A-204ENST00000463684 TBC1D4O60343 1298 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 DEXIO95424 95 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 ARF4P18085 180 aaPredicted RBP16.08■□□□□ 0.16
SMC1A-204ENST00000463684 RPS6KB1P23443 525 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 HOXA9P31269 272 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
SMC1A-204ENST00000463684 PSMD5Q16401 504 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 RTP2Q5QGT7 225 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 SLC27A1Q6PCB7 646 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 GSTCDQ8NEC7 633 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 KXD1Q9BQD3 176 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 CLSTN3Q9BQT9 956 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 RTKNQ9BST9 563 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 EPC1Q9H2F5 836 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 KCNMB3Q9NPA1 279 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 RGL1Q9NZL6 768 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 KLK14Q9P0G3 267 aa16.08■□□□□ 0.16
SMC1A-204ENST00000463684 MRPS17Q9Y2R5 130 aaKnown RBP16.08■□□□□ 0.16
SMC1A-204ENST00000463684 CPLX1O14810 134 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 NPTXRO95502 500 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
SMC1A-204ENST00000463684 PSMA5P28066 241 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 MBTD1Q05BQ5 628 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 TUSC3Q13454 348 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 CTTNQ14247 550 aaKnown RBP16.07■□□□□ 0.16
SMC1A-204ENST00000463684 UVSSAQ2YD98 709 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 FAM171A1Q5VUB5 890 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 NCAPH2Q6IBW4 605 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 PPP4R3AQ6IN85 833 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 PDXDC1Q6P996 788 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 ZNF852Q6ZMS4 543 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 TPRG1Q6ZUI0 275 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
SMC1A-204ENST00000463684 TPH2Q8IWU9 490 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
SMC1A-204ENST00000463684 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 LNX1Q8TBB1 728 aaPredicted RBP16.07■□□□□ 0.16
SMC1A-204ENST00000463684 HASPINQ8TF76 798 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 PIK3R5Q8WYR1 880 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 KCNB2Q92953 911 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 CLDN23Q96B33 292 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 DYDC2Q96IM9 177 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 GMEB2Q9UKD1 530 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
SMC1A-204ENST00000463684 ZMYM2Q9UBW7 1377 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 CCDC194A0A1B0GVG4 234 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 DCDC2BA2VCK2 349 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 ZBTB39O15060 712 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 TBX3O15119 743 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 LILRB5O75023 590 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 CDC45O75419 566 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
SMC1A-204ENST00000463684 CYP4A11Q02928 519 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 ELAVL2Q12926 359 aaKnown RBP16.06■□□□□ 0.16
SMC1A-204ENST00000463684 AMHR2Q16671 573 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
SMC1A-204ENST00000463684 AXDND1Q5T1B0 1012 aaPredicted RBP16.06■□□□□ 0.16
SMC1A-204ENST00000463684 NEK8Q86SG6 692 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 SLC7A14Q8TBB6 771 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 NAP1L4Q99733 375 aaKnown RBP16.06■□□□□ 0.16
SMC1A-204ENST00000463684 PAAF1Q9BRP4 392 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 FAM126AQ9BYI3 521 aaPredicted RBP16.06■□□□□ 0.16
SMC1A-204ENST00000463684 RAB23Q9ULC3 237 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 KCNH3Q9ULD8 1083 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 OTOGLQ3ZCN5 2332 aa16.06■□□□□ 0.16
SMC1A-204ENST00000463684 A0A1B0GUA9 196 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 CASTOR2A6NHX0 329 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 B4GALT5O43286 388 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 CCNT1O60563 726 aaKnown RBP16.05■□□□□ 0.16
SMC1A-204ENST00000463684 BAG4O95429 457 aaKnown RBP16.05■□□□□ 0.16
SMC1A-204ENST00000463684 POU2F2P09086 479 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 TARSP26639 723 aaKnown RBP16.05■□□□□ 0.16
SMC1A-204ENST00000463684 HSPA4P34932 840 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 NRLP54845 237 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 EVCP57679 992 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 CAPSQ13938 189 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
SMC1A-204ENST00000463684 TSSK4Q6SA08 328 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 CDR2LQ86X02 465 aaPredicted RBP16.05■□□□□ 0.16
SMC1A-204ENST00000463684 NELL1Q92832 810 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
SMC1A-204ENST00000463684 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
SMC1A-204ENST00000463684 XPNPEP1Q9NQW7 623 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms