RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 GDAQ9Y2T3 454 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC1-203ENST00000463172 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 FAM13AO94988 1023 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 MCF2P10911 925 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 MTHFRP42898 656 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 MATR3P43243 847 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC1-203ENST00000463172 RAD51AP2Q09MP3 1159 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 MAPK7Q13164 816 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 KCNC3Q14003 757 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 HSP90AA2PQ14568 343 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-203ENST00000463172 CBX2Q14781 532 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-203ENST00000463172 USP41Q3LFD5 358 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 NT5DC1Q5TFE4 455 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 PDXDC1Q6P996 788 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 GPR65Q8IYL9 337 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 DAW1Q8N136 415 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 VN1R2Q8NFZ6 395 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 AUTS2Q8WXX7 1259 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 LARP4BQ92615 738 aaKnown RBP14.37□□□□□ -0.11
HDAC1-203ENST00000463172 RAD54LQ92698 747 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 RIPOR3Q96MK2 946 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 UROC1Q96N76 676 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 ZNF396Q96N95 335 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-203ENST00000463172 ACO2Q99798 780 aaKnown RBP14.37□□□□□ -0.11
HDAC1-203ENST00000463172 CCSER1Q9C0I3 900 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 PARVGQ9HBI0 331 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 MIOSQ9NXC5 875 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 STK17AQ9UEE5 414 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 ADAM28Q9UKQ2 775 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 SRPRBQ9Y5M8 271 aaKnown RBP14.37□□□□□ -0.11
HDAC1-203ENST00000463172 CLIC4Q9Y696 253 aa14.37□□□□□ -0.11
HDAC1-203ENST00000463172 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 C2CD2LO14523 706 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 B4GALT3O60512 393 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 TOM1L1O75674 476 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 PLCG1P19174 1290 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 GRM5P41594 1212 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 DHX8Q14562 1220 aaKnown RBP14.36□□□□□ -0.11
HDAC1-203ENST00000463172 KARSQ15046 597 aaKnown RBP14.36□□□□□ -0.11
HDAC1-203ENST00000463172 KYAT1Q16773 422 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 EEF1DP3Q658K8 133 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 FUT10Q6P4F1 479 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 MPZL3Q6UWV2 235 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 ZPBP2Q6X784 338 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 MYCT1Q8N699 235 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
HDAC1-203ENST00000463172 GSTCDQ8NEC7 633 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 BICD1Q96G01 975 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 ACAP3Q96P50 834 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 KLHL5Q96PQ7 755 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 ADAM7Q9H2U9 754 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 SFXN1Q9H9B4 322 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 SLC38A7Q9NVC3 462 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 MARCH5Q9NX47 278 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 MTMR6Q9Y217 621 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 NR2E1Q9Y466 385 aa14.36□□□□□ -0.11
HDAC1-203ENST00000463172 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-203ENST00000463172 MORC2Q9Y6X9 1032 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-203ENST00000463172 MYH15Q9Y2K3 1946 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 DCXO43602 365 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 TRAPPC3O43617 180 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 C1RP00736 705 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 MAPTP10636 758 aaKnown RBP14.35□□□□□ -0.11
HDAC1-203ENST00000463172 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-203ENST00000463172 DDIT3P35638 169 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 RBM10P98175 930 aaKnown RBP14.35□□□□□ -0.11
HDAC1-203ENST00000463172 DSG1Q02413 1049 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
HDAC1-203ENST00000463172 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC1-203ENST00000463172 STK38Q15208 465 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 PTPAQ15257 358 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 TMEM31Q5JXX7 168 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 ATAT1Q5SQI0 421 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 RRAGBQ5VZM2 374 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 SYCE2Q6PIF2 218 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 CCDC73Q6ZRK6 1079 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 ZBTB33Q86T24 672 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 TMEM161BQ8NDZ6 487 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 SUSD6Q92537 303 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 TARS2Q9BW92 718 aaKnown RBP14.35□□□□□ -0.11
HDAC1-203ENST00000463172 VN1R3Q9BXE9 311 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 CDT1Q9H211 546 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 S1PR5Q9H228 398 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 ZHX3Q9H4I2 956 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 USP20Q9Y2K6 914 aa14.35□□□□□ -0.11
HDAC1-203ENST00000463172 CASTOR2A6NHX0 329 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 K7ENM7 598 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 CLDN3O15551 220 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 BRD1O95696 1058 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 GLUD1P00367 558 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 CNPP09543 421 aaKnown RBP14.34□□□□□ -0.11
HDAC1-203ENST00000463172 LIG4P49917 911 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 CLCN4P51793 760 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 NCKAP1LP55160 1127 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 MCM6Q14566 821 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 SLC39A14Q15043 492 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms