RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ZFPM1Q8IX07 1006 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 ZNF527Q8NB42 609 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 CFHR4Q92496 578 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 NKD2Q969F2 451 aaPredicted RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 C7orf26Q96N11 449 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 POFUT1Q9H488 388 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 PNPOQ9NVS9 261 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 FBXO10Q9UK96 956 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 LMTK3Q96Q04 1460 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 SGPL1O95470 568 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 MST1LQ2TV78 715 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 MEGF10Q96KG7 1140 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 GULP1Q9UBP9 304 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 ZNF112Q9UJU3 913 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 COA3Q9Y2R0 106 aaPredicted RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 HGSO14964 777 aaPredicted RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 LRG1P02750 347 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 PARP1P09874 1014 aaKnown RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 GUCY1A2P33402 732 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 SEC24CP53992 1094 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 SNRPNP63162 240 aaKnown RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 MEA1Q16626 185 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 STEAP3Q658P3 488 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 TIGD7Q6NT04 549 aaPredicted RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 Q6ZVL8 140 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 KRT74Q7RTS7 529 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 HSPA12BQ96MM6 686 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 TWNKQ96RR1 684 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 ALDH8A1Q9H2A2 487 aaPredicted RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 MRPL46Q9H2W6 279 aaKnown RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 PRKRIP1Q9H875 184 aaPredicted RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 OBP2BQ9NPH6 170 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 AFF4Q9UHB7 1163 aaKnown RBP3.57□□□□□ -1.84
SMC4-203ENST00000462668 CORO2BQ9UQ03 480 aa3.57□□□□□ -1.84
SMC4-203ENST00000462668 A0A0B4J269 797 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 ANKRD18BA2A2Z9 1011 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 ELF1P32519 619 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 TMEM132BQ14DG7 1078 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 PAOXQ6QHF9 649 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 KRT73Q86Y46 540 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 GPR156Q8NFN8 814 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 CHCHD6Q9BRQ6 235 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 TMX4Q9H1E5 349 aaPredicted RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 FTSJ1Q9UET6 329 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 SLC39A10Q9ULF5 831 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 NOL7Q9UMY1 257 aaKnown RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 C9orf172C9J069 976 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 GRM6O15303 877 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 IRAK2O43187 625 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 FIBPO43427 364 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 FTLP02792 175 aaPredicted RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 ADRB2P07550 413 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 MSL3P1P0C860 447 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 IL11P20809 199 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 HOXD12P35452 270 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 STARD3Q14849 445 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 RAB30Q15771 203 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 USP17L6PQ6QN14 398 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 SHISA2Q6UWI4 295 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 MIGA2Q7L4E1 593 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 SHISA4Q96DD7 197 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 PNPLA8Q9NP80 782 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 DACT1Q9NYF0 836 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 LMCD1Q9NZU5 365 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 SYNPO2Q9UMS6 1093 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 MBD3L4A6NDZ8 208 aaPredicted RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 MBD3L3A6NE82 208 aaPredicted RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 KRIT1O00522 736 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 KLHL18O94889 574 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 MBD4O95243 580 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 BMP3P12645 472 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 TGM1P22735 817 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 LORP23490 312 aaPredicted RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 G3BP1Q13283 466 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMC4-203ENST00000462668 MTM1Q13496 603 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 LAPTM5Q13571 262 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 CDC37Q16543 378 aaPredicted RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 ZPBP2Q6X784 338 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 CXXC5Q7LFL8 322 aaKnown RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 GLIS1Q8NBF1 620 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 NSUN4Q96CB9 384 aaKnown RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 SORBS1Q9BX66 1292 aaKnown RBP3.56□□□□□ -1.84
SMC4-203ENST00000462668 SERHLQ9NQF3 203 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 ANKEF1Q9NU02 776 aa3.56□□□□□ -1.84
SMC4-203ENST00000462668 ANXA2P07355 339 aaKnown RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 SPATA31C1P0DKV0 1188 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 ITGA8P53708 1063 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 SLC6A3Q01959 620 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 NFATC3Q12968 1075 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 MBTPS1Q14703 1052 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 SLFN12LQ6IEE8 588 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 ALYREFQ86V81 257 aaKnown RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 THAP4Q8WY91 577 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 FERMT2Q96AC1 680 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 SNX22Q96L94 193 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 HEPHQ9BQS7 1158 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 MYOTQ9UBF9 498 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 JAG2Q9Y219 1238 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 A6NLC8 198 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 IFIT1P09914 478 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms