RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SLC1A1P43005 524 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CRKP46108 304 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 GCLMP48507 274 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 MARCKSL1P49006 195 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 PEX5P50542 639 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 SCNN1DP51172 638 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ALDH5A1P51649 535 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 STAT2P52630 851 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CDR2Q01850 454 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CCDC15Q0P6D6 951 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 NFIAQ12857 509 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 NR1H3Q13133 447 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF268Q14587 947 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 STAT4Q14765 748 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 LRRC14Q15048 493 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ZKSCAN8Q15776 578 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 GALNTL6Q49A17 601 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CCDC38Q502W7 563 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 EPC2Q52LR7 807 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CEP55Q53EZ4 464 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 TNFAIP8L3Q5GJ75 292 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 LIN9Q5TKA1 542 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 RNF43Q68DV7 783 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ACAD10Q6JQN1 1059 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 PHLDB3Q6NSJ2 640 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 APOBEC3HQ6NTF7 200 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF746Q6NUN9 644 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 AADACL2Q6P093 401 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF365Q70YC5 407 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ENOSF1Q7L5Y1 443 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 OTUD6AQ7L8S5 288 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 OTOP1Q7RTM1 612 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 MIER3Q7Z3K6 550 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 NOP9Q86U38 636 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 EXOC3L1Q86VI1 746 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 FAM228AQ86W67 206 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 PALB2Q86YC2 1186 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 FAM71AQ8IYT1 594 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ANKRD35Q8N283 1001 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 AGGF1Q8N302 714 aaeCLIP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CERS5Q8N5B7 392 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 XXYLT1Q8NBI6 393 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 RDH13Q8NBN7 331 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 EPS8L1Q8TE68 723 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 TMEM174Q8WUU8 243 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CD101Q93033 1021 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 MIEF2Q96C03 454 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 STAMBPL1Q96FJ0 436 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 L3MBTL3Q96JM7 780 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 MAGEB18Q96M61 343 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ZDHHC15Q96MV8 337 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 TTC25Q96NG3 672 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 NT5C1BQ96P26 610 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 TGS1Q96RS0 853 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 FIZ1Q96SL8 496 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 P2RX7Q99572 595 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 RIT2Q99578 217 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 LXNQ9BS40 222 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF577Q9BSK1 485 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 WDR18Q9BV38 432 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 FOXP3Q9BZS1 431 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 TRIM6Q9C030 488 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 CDC42EP4Q9H3Q1 356 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 UNC45AQ9H3U1 944 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 PCIF1Q9H4Z3 704 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 DNAJC18Q9H819 358 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ARHGEF10LQ9HCE6 1279 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 LRRC4CQ9HCJ2 640 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 KCNQ5Q9NR82 932 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 HSPBP1Q9NZL4 362 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 KLHL14Q9P2G3 628 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 TCEAL9Q9UHQ7 104 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 LGALS13Q9UHV8 139 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ANAPC5Q9UJX4 755 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 NOCTQ9UK39 431 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 DBR1Q9UK59 544 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 AGAP1Q9UPQ3 857 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 USP20Q9Y2K6 914 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 MRPL11Q9Y3B7 192 aaKnown RBP3.76□□□□□ -1.81
COL8A1-204ENST00000462604 ACTL7BQ9Y614 415 aa3.76□□□□□ -1.81
COL8A1-204ENST00000462604 NAV1Q8NEY1 1877 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 WNK3Q9BYP7 1800 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 TCRBV7S2A1N4TA0A589 114 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 FAM170AA1A519 330 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 FAM47DPA6NHR8 397 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 FAM196BA6NMK8 535 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 E7ENQ6 273 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 UBAP1LF5GYI3 381 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CYP26A1O43174 497 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ATMINO43313 823 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PSTPIP1O43586 416 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 HNRNPCL1O60812 293 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CDH16O75309 829 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 DCTN3O75935 186 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 NEBLO76041 1014 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 SLITRK3O94933 977 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 GDF11O95390 407 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ANP32DO95626 131 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 GH2P01242 217 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms