RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 MSLNLQ96KJ4 702 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 VN1R3Q9BXE9 311 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 ZHX3Q9H4I2 956 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 PARVGQ9HBI0 331 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 PTPRHQ9HD43 1115 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 MARCH5Q9NX47 278 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 STK17AQ9UEE5 414 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 IRAK3Q9Y616 596 aa20.73■□□□□ 0.91
SLC6A1-204ENST00000462473 SPTLC2O15270 562 aa20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 TBCAO75347 108 aaKnown RBP20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 F13A1P00488 732 aa20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 MAPTP10636 758 aaKnown RBP20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 YARSP54577 528 aaKnown RBP20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 NCKAP1LP55160 1127 aa20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 COASYQ13057 564 aa20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 FOXD4L6Q3SYB3 417 aaPredicted RBP20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 FOXD4L3Q6VB84 417 aaPredicted RBP20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 TMEM184AQ6ZMB5 413 aa20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 HAUS6Q7Z4H7 955 aa20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 CCDC94Q9BW85 323 aaPredicted RBP20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 CDT1Q9H211 546 aa20.72■□□□□ 0.91
SLC6A1-204ENST00000462473 PTGESO14684 152 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 TRAK2O60296 914 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 CLASP2O75122 1294 aaKnown RBP20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 SOD2P04179 222 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 GRM5P41594 1212 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 OSTNP61366 133 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 TUSC3Q13454 348 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 KCNC3Q14003 757 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 PTPN14Q15678 1187 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 SMAD2Q15796 467 aaKnown RBP20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 MPZL3Q6UWV2 235 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 CCDC73Q6ZRK6 1079 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 SV2BQ7L1I2 683 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 PANK2Q9BZ23 570 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 CXCL16Q9H2A7 254 aa20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 MRPL17Q9NRX2 175 aaKnown RBP20.71■□□□□ 0.91
SLC6A1-204ENST00000462473 F8W810 466 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 K7ENM7 598 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 PPP6R2O75170 966 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 TOM1L1O75674 476 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 URODP06132 367 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 MCF2P10911 925 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 HARSP12081 509 aaKnown RBP20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 PROZP22891 400 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 ZNF131P52739 623 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 ANKRD54Q6NXT1 300 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 CEP120Q8N960 986 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 SMRP1Q8NCR6 262 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 RABGGTAQ92696 567 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 CASP10Q92851 521 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 BICD1Q96G01 975 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 ZBTB45Q96K62 511 aaPredicted RBP20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 HERC2P3Q9BVR0 1158 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 EMILIN2Q9BXX0 1053 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 TOPORSQ9NS56 1045 aaPredicted RBP20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 ANKFY1Q9P2R3 1169 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 SSX2IPQ9Y2D8 614 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 HCFC2Q9Y5Z7 792 aa20.7■□□□□ 0.9
SLC6A1-204ENST00000462473 CASTOR2A6NHX0 329 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 C2CD2LO14523 706 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 TADA2AO75478 443 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 YEATS4O95619 227 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 SSTR3P32745 418 aaPredicted RBP20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 STAT6P42226 847 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 MATR3P43243 847 aaKnown RBP eCLIP20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 HSP90AA2PQ14568 343 aaPredicted RBP20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 GLRA4Q5JXX5 417 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 KIAA1841Q6NSI8 718 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 FUT10Q6P4F1 479 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 ZPBP2Q6X784 338 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 DYMQ7RTS9 669 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 TAS1R1Q7RTX1 841 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 GJD3Q8N144 294 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 ACAP3Q96P50 834 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 CACNG4Q9UBN1 327 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 PRKAG3Q9UGI9 489 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 ADAM28Q9UKQ2 775 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 REV3LO60673 3130 aa20.69■□□□□ 0.9
SLC6A1-204ENST00000462473 TDRD15B5MCY1 1934 aaKnown RBP20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 ABLIM1O14639 778 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 CLDN3O15551 220 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 BRD1O95696 1058 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 SCP2P22307 547 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 KLRC2P26717 231 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 GLUD2P49448 558 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 PKP1Q13835 747 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 PDILTQ8N807 584 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 DDX12PQ92771 950 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 KLHL5Q96PQ7 755 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 PAAF1Q9BRP4 392 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 TBX20Q9UMR3 447 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 VCANP13611 3396 aa20.68■□□□□ 0.9
SLC6A1-204ENST00000462473 A0A0C4DFX4 3053 aa20.67■□□□□ 0.9
SLC6A1-204ENST00000462473 MYH11P35749 1972 aa20.67■□□□□ 0.9
SLC6A1-204ENST00000462473 HOXB8P17481 243 aaPredicted RBP20.67■□□□□ 0.9
SLC6A1-204ENST00000462473 LIG4P49917 911 aa20.67■□□□□ 0.9
SLC6A1-204ENST00000462473 NOLC1Q14978 699 aaKnown RBP eCLIP20.67■□□□□ 0.9
SLC6A1-204ENST00000462473 NAB2Q15742 525 aa20.67■□□□□ 0.9
SLC6A1-204ENST00000462473 PPFIBP1Q86W92 1011 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms