RNA–Protein interactions for RNA: ENST00000461944.1

NGEF-208, Transcript of neuronal guanine nucleotide exchange factor, humanhuman

TSL 4

Gene NGEF, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGEF-208ENST00000461944 LIMA1Q9UHB6 759 aaKnown RBP20.02■□□□□ 0.8
NGEF-208ENST00000461944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.02■□□□□ 0.8
NGEF-208ENST00000461944 RBAK-RBAKDNI3L0D1 243 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 MAPK13O15264 365 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 CBFA2T2O43439 604 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 NBNO60934 754 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 TPM3P06753 285 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 RAG1P15918 1043 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 TNFSF9P41273 254 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 COPB1P53618 953 aaKnown RBP20.01■□□□□ 0.79
NGEF-208ENST00000461944 MARSP56192 900 aaKnown RBP20.01■□□□□ 0.79
NGEF-208ENST00000461944 CYP24A1Q07973 514 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 MAN2A1Q16706 1144 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 BRSK2Q8IWQ3 736 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 HACE1Q8IYU2 909 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 C7orf61Q8IZ16 206 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 CCDC127Q96BQ5 260 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 HTATIP2Q9BUP3 242 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 CCDC94Q9BW85 323 aaPredicted RBP20.01■□□□□ 0.79
NGEF-208ENST00000461944 APOL6Q9BWW8 343 aa20.01■□□□□ 0.79
NGEF-208ENST00000461944 NXF3Q9H4D5 531 aaKnown RBP20.01■□□□□ 0.79
NGEF-208ENST00000461944 KIAA0355O15063 1070 aa20■□□□□ 0.79
NGEF-208ENST00000461944 FAM189A1O60320 539 aa20■□□□□ 0.79
NGEF-208ENST00000461944 STAG3L1P0CL83 205 aa20■□□□□ 0.79
NGEF-208ENST00000461944 RFC2P35250 354 aa20■□□□□ 0.79
NGEF-208ENST00000461944 GRM5P41594 1212 aa20■□□□□ 0.79
NGEF-208ENST00000461944 RAB27AP51159 221 aa20■□□□□ 0.79
NGEF-208ENST00000461944 SARM1Q6SZW1 724 aa20■□□□□ 0.79
NGEF-208ENST00000461944 DEFB128Q7Z7B8 93 aa20■□□□□ 0.79
NGEF-208ENST00000461944 TRIM59Q8IWR1 403 aa20■□□□□ 0.79
NGEF-208ENST00000461944 ANP32BQ92688 251 aaKnown RBP20■□□□□ 0.79
NGEF-208ENST00000461944 APBB2Q92870 758 aa20■□□□□ 0.79
NGEF-208ENST00000461944 FAM212AQ96EL1 285 aa20■□□□□ 0.79
NGEF-208ENST00000461944 FNBP1Q96RU3 617 aa20■□□□□ 0.79
NGEF-208ENST00000461944 FTHL17Q9BXU8 183 aa20■□□□□ 0.79
NGEF-208ENST00000461944 TRIM5Q9C035 493 aa20■□□□□ 0.79
NGEF-208ENST00000461944 VPS16Q9H269 839 aa20■□□□□ 0.79
NGEF-208ENST00000461944 TMX1Q9H3N1 280 aa20■□□□□ 0.79
NGEF-208ENST00000461944 MMRN2Q9H8L6 949 aa20■□□□□ 0.79
NGEF-208ENST00000461944 RPF1Q9H9Y2 349 aaKnown RBP20■□□□□ 0.79
NGEF-208ENST00000461944 IFNKQ9P0W0 207 aa20■□□□□ 0.79
NGEF-208ENST00000461944 CPSF3Q9UKF6 684 aaKnown RBP20■□□□□ 0.79
NGEF-208ENST00000461944 PDCD11Q14690 1871 aaKnown RBP20■□□□□ 0.79
NGEF-208ENST00000461944 TIMP1P01033 207 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 CLTAP09496 248 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 TRIM49P0CI25 452 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 TRIM49CP0CI26 452 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 CXCL8P10145 99 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 DLATP10515 647 aaKnown RBP19.99■□□□□ 0.79
NGEF-208ENST00000461944 VAMP7P51809 220 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 YARSP54577 528 aaKnown RBP19.99■□□□□ 0.79
NGEF-208ENST00000461944 UBASH3AP57075 661 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 PPP2R3AQ06190 1150 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 UBXN11Q5T124 520 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 ADAM2Q99965 735 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 FAM105AQ9NUU6 356 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 IPPQ9Y573 584 aa19.99■□□□□ 0.79
NGEF-208ENST00000461944 MICAL3Q7RTP6 2002 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 TRIM43BA6NCK2 446 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 MGEA5O60502 916 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 AFPP02771 609 aaKnown RBP19.98■□□□□ 0.79
NGEF-208ENST00000461944 VWA3BQ502W6 1294 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 PLEKHG4Q58EX7 1191 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 FKBP15Q5T1M5 1219 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 CRELD2Q6UXH1 353 aaPredicted RBP19.98■□□□□ 0.79
NGEF-208ENST00000461944 TRIM43Q96BQ3 446 aaPredicted RBP19.98■□□□□ 0.79
NGEF-208ENST00000461944 ACAP3Q96P50 834 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 TOPORSQ9NS56 1045 aaPredicted RBP19.98■□□□□ 0.79
NGEF-208ENST00000461944 SNTG2Q9NY99 539 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 HES2Q9Y543 173 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 PCDHB2Q9Y5E7 798 aa19.98■□□□□ 0.79
NGEF-208ENST00000461944 MKI67P46013 3256 aaKnown RBP19.98■□□□□ 0.79
NGEF-208ENST00000461944 LGALS16A8MUM7 142 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 STX10O60499 249 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 RECQL4O94761 1208 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 IL18RAPO95256 599 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 DSC3Q14574 896 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 PSMD6Q15008 389 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 SURF1Q15526 300 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 ENOX2Q16206 610 aaKnown RBP19.97■□□□□ 0.79
NGEF-208ENST00000461944 TMEM192Q8IY95 271 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 TMEM199Q8N511 208 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 RNF169Q8NCN4 708 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 DBF4BQ8NFT6 615 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 SLC35C1Q96A29 364 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 MFSD14AQ96MC6 490 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 XPO4Q9C0E2 1151 aaKnown RBP19.97■□□□□ 0.79
NGEF-208ENST00000461944 PARP2Q9UGN5 583 aa19.97■□□□□ 0.79
NGEF-208ENST00000461944 A0A1B0GTH6 734 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 LRRIQ3A6PVS8 624 aaPredicted RBP19.96■□□□□ 0.79
NGEF-208ENST00000461944 EVI5O60447 810 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 CXCL10P02778 98 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 SKIP12755 728 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 ITGA4P13612 1032 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 TNNI1P19237 187 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 MYL7Q01449 175 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 APTXQ7Z2E3 356 aaKnown RBP19.96■□□□□ 0.79
NGEF-208ENST00000461944 TMC2Q8TDI7 906 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 BORCS6Q96GS4 357 aa19.96■□□□□ 0.79
NGEF-208ENST00000461944 CGRRF1Q99675 332 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms