RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 LIN9Q5TKA1 542 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 FUT10Q6P4F1 479 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 OTOP3Q7RTS5 596 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 C12orf76Q8N812 135 aaPredicted RBP9.75□□□□□ -0.85
LDB1-203ENST00000461873 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 RIN2Q8WYP3 895 aaPredicted RBP9.75□□□□□ -0.85
LDB1-203ENST00000461873 SUSD6Q92537 303 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 BICD1Q96G01 975 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 KIF2CQ99661 725 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 S1PR5Q9H228 398 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 KCNH6Q9H252 994 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 MFSD1Q9H3U5 465 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 C5orf42Q9H799 3197 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 CCDC195A0A1B0GUA6 201 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 VPS37CA5D8V6 355 aaPredicted RBP9.74□□□□□ -0.85
LDB1-203ENST00000461873 TMEM221A6NGB7 291 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 CASTOR2A6NHX0 329 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 E9PMD0 336 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 M0R296 226 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 HIP1RO75146 1068 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 GBP2P32456 591 aaPredicted RBP9.74□□□□□ -0.85
LDB1-203ENST00000461873 TXLNAP40222 546 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 CLCN4P51793 760 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 AFF1P51825 1210 aaKnown RBP9.74□□□□□ -0.85
LDB1-203ENST00000461873 SIGLEC14Q08ET2 396 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 KCNC3Q14003 757 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 AMHR2Q16671 573 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 PTPN21Q16825 1174 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 ARL6IP4Q66PJ3 421 aaKnown RBP9.74□□□□□ -0.85
LDB1-203ENST00000461873 CYP26C1Q6V0L0 522 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 TRIM67Q6ZTA4 783 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 BRAPQ7Z569 592 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 PALB2Q86YC2 1186 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 GLYCTKQ8IVS8 523 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 UBALD2Q8IYN6 164 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 AK8Q96MA6 479 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 UROC1Q96N76 676 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 PLIN2Q99541 437 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 KIFC3Q9BVG8 833 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 ZHX3Q9H4I2 956 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 PLEKHA4Q9H4M7 779 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 POMKQ9H5K3 350 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 PDZD7Q9H5P4 517 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 MAN1C1Q9NR34 630 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.74□□□□□ -0.85
LDB1-203ENST00000461873 SLC38A7Q9NVC3 462 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 KCND2Q9NZV8 630 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 LARSQ9P2J5 1176 aaKnown RBP9.74□□□□□ -0.85
LDB1-203ENST00000461873 RAPGEFL1Q9UHV5 662 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 USTQ9Y2C2 406 aa9.74□□□□□ -0.85
LDB1-203ENST00000461873 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
LDB1-203ENST00000461873 STK25O00506 426 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 INPPL1O15357 1258 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 TEX28O15482 410 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 SLC26A4O43511 780 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 RECQL4O94761 1208 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 B3GAT3O94766 335 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
LDB1-203ENST00000461873 WEE2P0C1S8 567 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 HARSP12081 509 aaKnown RBP9.73□□□□□ -0.85
LDB1-203ENST00000461873 CDC25AP30304 524 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 ABCD1P33897 745 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 NPTX2P47972 431 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 TOB1P50616 345 aaPredicted RBP9.73□□□□□ -0.85
LDB1-203ENST00000461873 OSTNP61366 133 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
LDB1-203ENST00000461873 DSG1Q02413 1049 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 DSC1Q08554 894 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 RAD51AP2Q09MP3 1159 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 FAM171A1Q5VUB5 890 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 RINT1Q6NUQ1 792 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 C15orf39Q6ZRI6 1047 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 GPR149Q86SP6 731 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 C4orf32Q8N8J7 132 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 KREMEN2Q8NCW0 462 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 HASPINQ8TF76 798 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 SLC22A17Q8WUG5 538 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 HDAC7Q8WUI4 952 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 BCL7CQ8WUZ0 217 aaPredicted RBP9.73□□□□□ -0.85
LDB1-203ENST00000461873 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
LDB1-203ENST00000461873 ACAP3Q96P50 834 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 TTPALQ9BTX7 342 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 IRF2BPLQ9H1B7 796 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 TMEM134Q9H6X4 195 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 POLD4Q9HCU8 107 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 MIOSQ9NXC5 875 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 FBXL21Q9UKT6 434 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 SORCS3Q9UPU3 1222 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 TNFSF13BQ9Y275 285 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 NUB1Q9Y5A7 615 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 BDP1A6H8Y1 2624 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 MYH11P35749 1972 aa9.73□□□□□ -0.85
LDB1-203ENST00000461873 PP2D1A8MPX8 630 aa9.72□□□□□ -0.85
LDB1-203ENST00000461873 SLC16A4O15374 487 aa9.72□□□□□ -0.85
LDB1-203ENST00000461873 CLDN3O15551 220 aa9.72□□□□□ -0.85
LDB1-203ENST00000461873 XYLBO75191 536 aa9.72□□□□□ -0.85
LDB1-203ENST00000461873 TBCAO75347 108 aaKnown RBP9.72□□□□□ -0.85
LDB1-203ENST00000461873 FAM13AO94988 1023 aa9.72□□□□□ -0.85
LDB1-203ENST00000461873 PLA2G4BP0C869 781 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms