RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PDZD7Q9H5P4 517 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
BRCA1-207ENST00000461798 DDX19AQ9NUU7 478 aaKnown RBP10.11□□□□□ -0.79
BRCA1-207ENST00000461798 DNM3Q9UQ16 869 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 USTQ9Y2C2 406 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 PRG3Q9Y2Y8 225 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-207ENST00000461798 NR2E1Q9Y466 385 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 ARID2Q68CP9 1835 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 CD2BP2O95400 341 aaKnown RBP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 PRKCBP05771 671 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 URODP06132 367 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 KLRC2P26717 231 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 CA8P35219 290 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 ATP2C1P98194 919 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 PTPN21Q16825 1174 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 HYIQ5T013 277 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 RARS2Q5T160 578 aaKnown RBP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 NT5DC1Q5TFE4 455 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 KRT79Q5XKE5 535 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 ARL6IP4Q66PJ3 421 aaKnown RBP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 CYP26C1Q6V0L0 522 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 HFE2Q6ZVN8 426 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 CABP7Q86V35 215 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 ZDHHC14Q8IZN3 488 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 C12orf76Q8N812 135 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 SNX29Q8TEQ0 813 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 FAM122AQ96E09 287 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 NTPCRQ9BSD7 190 aaKnown RBP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 MMTAG2Q9BU76 263 aaKnown RBP10.1□□□□□ -0.79
BRCA1-207ENST00000461798 APOL6Q9BWW8 343 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 POMKQ9H5K3 350 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 SFXN1Q9H9B4 322 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 C17orf75Q9HAS0 396 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 PARP2Q9UGN5 583 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 KCNG1Q9UIX4 513 aa10.1□□□□□ -0.79
BRCA1-207ENST00000461798 TECTAO75443 2155 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 PHLPP2Q6ZVD8 1323 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 E9PMD0 336 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 F8W810 466 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 K7ERI5 159 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 M0R296 226 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 PTGESO14684 152 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 TEX28O15482 410 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 SLC26A4O43511 780 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 EDN1P05305 212 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 SSBP05455 408 aaKnown RBP eCLIP10.09□□□□□ -0.79
BRCA1-207ENST00000461798 ADH1AP07327 375 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 GUCY2CP25092 1073 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 GJB2P29033 226 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 GLUD2P49448 558 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 SIGLEC14Q08ET2 396 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 TUSC3Q13454 348 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 NAB2Q15742 525 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 USP41Q3LFD5 358 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 DCAF4L1Q3SXM0 396 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 EEF1DP3Q658K8 133 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 RINT1Q6NUQ1 792 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 KANK3Q6NY19 840 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 FUT10Q6P4F1 479 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 LILRA6Q6PI73 481 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 C15orf39Q6ZRI6 1047 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 C1orf186Q6ZWK4 172 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 DAW1Q8N136 415 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 ADPGKQ9BRR6 497 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 TIPINQ9BVW5 301 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 GPR62Q9BZJ7 368 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 TMEM134Q9H6X4 195 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 POLD4Q9HCU8 107 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 PTPRHQ9HD43 1115 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.09□□□□□ -0.79
BRCA1-207ENST00000461798 SNTG2Q9NY99 539 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 KLK14Q9P0G3 267 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 FNIP2Q9P278 1114 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 DPP7Q9UHL4 492 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 CDH22Q9UJ99 828 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 ADAM28Q9UKQ2 775 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 TNFSF13BQ9Y275 285 aa10.09□□□□□ -0.79
BRCA1-207ENST00000461798 RBM19Q9Y4C8 960 aaKnown RBP10.09□□□□□ -0.79
BRCA1-207ENST00000461798 PP2D1A8MPX8 630 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 C2CD4DB7Z1M9 353 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 H3BQV1 296 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 TADA2AO75478 443 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 RECQL4O94761 1208 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 THP07101 528 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 CDC25AP30304 524 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 NPTX2P47972 431 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 CREMQ03060 361 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 MAPK7Q13164 816 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 HSP90AA2PQ14568 343 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-207ENST00000461798 XKR4Q5GH76 650 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 ATF7IP2Q5U623 682 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 MCTP1Q6DN14 999 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 ELMSAN1Q6PJG2 1045 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 TMC5Q6UXY8 1006 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 KCNK18Q7Z418 384 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 APBB1IPQ7Z5R6 666 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-207ENST00000461798 UBALD2Q8IYN6 164 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms