RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 RUSC1Q9BVN2 902 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 DPP7Q9UHL4 492 aa15.36■□□□□ 0.05
USP4-206ENST00000461553 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
USP4-206ENST00000461553 SF3B1O75533 1304 aaKnown RBP eCLIP15.36■□□□□ 0.05
USP4-206ENST00000461553 CASTOR2A6NHX0 329 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 GLUD1P00367 558 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 WEE2P0C1S8 567 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 ZXDAP98168 799 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 DSG1Q02413 1049 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 CREMQ03060 361 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 IL17AQ16552 155 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 PTPN21Q16825 1174 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 USP41Q3LFD5 358 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 EEF1DP3Q658K8 133 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 ARL6IP4Q66PJ3 421 aaKnown RBP15.35■□□□□ 0.05
USP4-206ENST00000461553 TMC5Q6UXY8 1006 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 CCDC149Q6ZUS6 474 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 HFE2Q6ZVN8 426 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 MMTAG2Q9BU76 263 aaKnown RBP15.35■□□□□ 0.05
USP4-206ENST00000461553 TIPINQ9BVW5 301 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 POLD4Q9HCU8 107 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 MAN1C1Q9NR34 630 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.35■□□□□ 0.05
USP4-206ENST00000461553 USP20Q9Y2K6 914 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 GDAQ9Y2T3 454 aa15.35■□□□□ 0.05
USP4-206ENST00000461553 WDFY4Q6ZS81 3184 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 C2CD4DB7Z1M9 353 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 K7ERI5 159 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 PTGESO14684 152 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 TEX28O15482 410 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 LILRB3O75022 631 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 EFEMP2O95967 443 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 THP07101 528 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 NPTX2P47972 431 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 ZNF568Q3ZCX4 644 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 HYIQ5T013 277 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 LARP1BQ659C4 914 aaKnown RBP15.34■□□□□ 0.05
USP4-206ENST00000461553 RINT1Q6NUQ1 792 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 TRIM67Q6ZTA4 783 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 KCNK18Q7Z418 384 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 KCTD17Q8N5Z5 321 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 HASPINQ8TF76 798 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 MRPL4Q9BYD3 311 aaKnown RBP15.34■□□□□ 0.05
USP4-206ENST00000461553 C17orf75Q9HAS0 396 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 KMT5AQ9NQR1 393 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 ARHGAP28Q9P2N2 729 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 CACNG4Q9UBN1 327 aa15.34■□□□□ 0.05
USP4-206ENST00000461553 TMEM221A6NGB7 291 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 M0R296 226 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 TADA2AO75478 443 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 KIF4AO95239 1232 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 BMP15O95972 392 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 GUCY2CP25092 1073 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 SIGLEC14Q08ET2 396 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 NT5DC1Q5TFE4 455 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 KIAA0319Q5VV43 1072 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 C15orf39Q6ZRI6 1047 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 C1orf186Q6ZWK4 172 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 TAS1R1Q7RTX1 841 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 BRAPQ7Z569 592 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 GPR149Q86SP6 731 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 DAW1Q8N136 415 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 RIN2Q8WYP3 895 aaPredicted RBP15.33■□□□□ 0.04
USP4-206ENST00000461553 RABGGTAQ92696 567 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 B3GALT6Q96L58 329 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 AK8Q96MA6 479 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 GPR62Q9BZJ7 368 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 TMEM134Q9H6X4 195 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 RXFP1Q9HBX9 757 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
USP4-206ENST00000461553 TNFSF13BQ9Y275 285 aa15.33■□□□□ 0.04
USP4-206ENST00000461553 VPS37CA5D8V6 355 aaPredicted RBP15.32■□□□□ 0.04
USP4-206ENST00000461553 YARSP54577 528 aaKnown RBP15.32■□□□□ 0.04
USP4-206ENST00000461553 ELAVL2Q12926 359 aaKnown RBP15.32■□□□□ 0.04
USP4-206ENST00000461553 STRN3Q13033 797 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 MAPK7Q13164 816 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 MTMR3Q13615 1198 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 GLRA4Q5JXX5 417 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 KANK3Q6NY19 840 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 SUGP1Q8IWZ8 645 aaKnown RBP15.32■□□□□ 0.04
USP4-206ENST00000461553 GPR65Q8IYL9 337 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 CMASQ8NFW8 434 aaPredicted RBP15.32■□□□□ 0.04
USP4-206ENST00000461553 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 PNMA5Q96PV4 448 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 CCDC94Q9BW85 323 aaPredicted RBP15.32■□□□□ 0.04
USP4-206ENST00000461553 CDT1Q9H211 546 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 CHST7Q9NS84 486 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 KCND2Q9NZV8 630 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 USTQ9Y2C2 406 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 RBM19Q9Y4C8 960 aaKnown RBP15.32■□□□□ 0.04
USP4-206ENST00000461553 DOCK6Q96HP0 2047 aa15.32■□□□□ 0.04
USP4-206ENST00000461553 SLC16A4O15374 487 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 SLC26A4O43511 780 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 GRM5P41594 1212 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 RAD51AP2Q09MP3 1159 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 TMEM119Q4V9L6 283 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 GLYCTKQ8IVS8 523 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 PLCD3Q8N3E9 789 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms