RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 SLC4A10Q6U841 1118 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 B3GNT9Q6UX72 402 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 USP45Q70EL2 814 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 SRGAP1Q7Z6B7 1085 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 UNC5BQ8IZJ1 945 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 GLB1L3Q8NCI6 653 aaPredicted RBP4.87□□□□□ -1.63
CLK1-206ENST00000461326 SLC35G2Q8TBE7 412 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 LARP4BQ92615 738 aaKnown RBP4.87□□□□□ -1.63
CLK1-206ENST00000461326 LPPQ93052 612 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 HPS3Q969F9 1004 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 HDAC10Q969S8 669 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 GFM2Q969S9 779 aaKnown RBP4.87□□□□□ -1.63
CLK1-206ENST00000461326 C1GALT1C1Q96EU7 318 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 WDR92Q96MX6 357 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 OR14A2Q96R54 314 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 TAAR9Q96RI9 348 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 AGAP2Q99490 1192 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 PRRX2Q99811 253 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 FAM204AQ9H8W3 233 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 ANLNQ9NQW6 1124 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 RBM12Q9NTZ6 932 aaKnown RBP4.87□□□□□ -1.63
CLK1-206ENST00000461326 SCOCQ9UIL1 159 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 DMRT1Q9Y5R6 373 aa4.87□□□□□ -1.63
CLK1-206ENST00000461326 CFAP20Q9Y6A4 193 aaKnown RBP4.87□□□□□ -1.63
CLK1-206ENST00000461326 FAM227AF5H4B4 570 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 H3BML4 177 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 AP1G1O43747 822 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 RAMP2O60895 175 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 ENDOD1O94919 500 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 TRIM27P14373 513 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 PHKG2P15735 406 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 MCAMP43121 646 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 ATXN1P54253 815 aaKnown RBP4.86□□□□□ -1.63
CLK1-206ENST00000461326 UBE4AQ14139 1066 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 EIF4HQ15056 248 aaKnown RBP4.86□□□□□ -1.63
CLK1-206ENST00000461326 THEMIS2Q5TEJ8 643 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 C11orf96Q7Z7L8 435 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 PRR18Q8N4B5 295 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 NAF1Q96HR8 494 aaKnown RBP4.86□□□□□ -1.63
CLK1-206ENST00000461326 LRGUKQ96M69 825 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 GTPBP4Q9BZE4 634 aaKnown RBP4.86□□□□□ -1.63
CLK1-206ENST00000461326 PRDM12Q9H4Q4 367 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 MAN1C1Q9NR34 630 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 SLC52A1Q9NWF4 448 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.86□□□□□ -1.63
CLK1-206ENST00000461326 PTPN22Q9Y2R2 807 aa4.86□□□□□ -1.63
CLK1-206ENST00000461326 SLC16A6O15403 523 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 CTNND1O60716 968 aaKnown RBP4.85□□□□□ -1.63
CLK1-206ENST00000461326 MAP4K4O95819 1239 aaPredicted RBP4.85□□□□□ -1.63
CLK1-206ENST00000461326 HMGCRP04035 888 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 PDCP20941 246 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 RPS19P39019 145 aaKnown RBP4.85□□□□□ -1.63
CLK1-206ENST00000461326 WNT3AP56704 352 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 MGAT5Q09328 741 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 PGS1Q32NB8 556 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 FNDC7Q5VTL7 733 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 GAREM2Q75VX8 874 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 FAM43AQ8N2R8 423 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 DIS3LQ8TF46 1054 aaKnown RBP4.85□□□□□ -1.63
CLK1-206ENST00000461326 NKD2Q969F2 451 aaPredicted RBP4.85□□□□□ -1.63
CLK1-206ENST00000461326 MVB12AQ96EY5 273 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 SLC2A13Q96QE2 648 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 FDXACB1Q9BRP7 624 aaPredicted RBP4.85□□□□□ -1.63
CLK1-206ENST00000461326 SARGQ9BW04 601 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 C12orf65Q9H3J6 166 aaKnown RBP4.85□□□□□ -1.63
CLK1-206ENST00000461326 MSL2Q9HCI7 577 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 KMT5AQ9NQR1 393 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 RPTORQ8N122 1335 aa4.85□□□□□ -1.63
CLK1-206ENST00000461326 FRMPD2Q68DX3 1309 aaPredicted RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 A0A0A6YYK5 440 aaPredicted RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 A0A1W2PR48 441 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 DAPK3O43293 454 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 HTRA2O43464 458 aaPredicted RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 SGTAO43765 313 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 HRGP04196 525 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 LTA4HP09960 611 aaKnown RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 HIBADHP31937 336 aaKnown RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 TOP3AQ13472 1001 aaPredicted RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 RNF151Q2KHN1 245 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 MAP9Q49MG5 647 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 C19orf54Q5BKX5 351 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 CHST15Q7LFX5 561 aaPredicted RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 CATIPQ7Z7H3 387 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 DENND1CQ8IV53 801 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 ZNF808Q8N4W9 903 aaPredicted RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 CAMKK1Q8N5S9 505 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 SAMD3Q8N6K7 520 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 PPM1NQ8N819 430 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 GPR156Q8NFN8 814 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 DPYSL5Q9BPU6 564 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 SOX7Q9BT81 388 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 ZNF703Q9H7S9 590 aaPredicted RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 SERPINB13Q9UIV8 391 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 DNM3Q9UQ16 869 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 REXO2Q9Y3B8 237 aaKnown RBP4.84□□□□□ -1.63
CLK1-206ENST00000461326 NR2E1Q9Y466 385 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 IPPQ9Y573 584 aa4.84□□□□□ -1.63
CLK1-206ENST00000461326 ANO9A1A5B4 782 aa4.83□□□□□ -1.64
CLK1-206ENST00000461326 LY86O95711 162 aa4.83□□□□□ -1.64
CLK1-206ENST00000461326 ZBED1O96006 694 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms