RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SNX14Q9Y5W7 946 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 BACE2Q9Y5Z0 518 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 PARP14Q460N5 1801 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 PDHBP11177 359 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 CPA1P15085 419 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 POU3F2P20265 443 aaPredicted RBP9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 NT5C2P49902 561 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 EXOSC10Q01780 885 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 COG2Q14746 738 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 FAM110CQ1W6H9 321 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 KCTD1Q719H9 257 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 AFAP1L2Q8N4X5 818 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 PRPF38AQ8NAV1 312 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 SMCR8Q8TEV9 937 aaPredicted RBP9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 FRS2Q8WU20 508 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 SLC12A9Q9BXP2 914 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 PORCNQ9H237 461 aa9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 TYW1Q9NV66 732 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 TNPO3Q9Y5L0 923 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-212ENST00000461239 ARNTLO00327 626 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 VWA5AO00534 786 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 EPB41L2O43491 1005 aaKnown RBP9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 FLOT1O75955 427 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 REC8O95072 547 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 GCLCP48506 637 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 ZNF460Q14592 562 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 TMEM132BQ14DG7 1078 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 TESK1Q15569 626 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 SLC35G1Q2M3R5 365 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 PLEKHG6Q3KR16 790 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 ACBD5Q5T8D3 534 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 OTOP1Q7RTM1 612 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 IQCA1Q86XH1 822 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 SPACA3Q8IXA5 215 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 DCAF4Q8WV16 495 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 TCEANC2Q96MN5 208 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 LRRC2Q9BYS8 371 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 LY9Q9HBG7 655 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 GPRC5CQ9NQ84 441 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 HOXC10Q9NYD6 342 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 KLHL42Q9P2K6 505 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 RNF112Q9ULX5 631 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 RABGAP1Q9Y3P9 1069 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 A0A0G2JMZ2 1700 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 FRMPD2Q68DX3 1309 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 MYPNQ86TC9 1320 aa9.3□□□□□ -0.92
ECHDC1-212ENST00000461239 C2orf71A6NGG8 1288 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 TMEM232C9JQI7 657 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 SH2B2O14492 632 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 IFIT3O14879 490 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 PRC1O43663 620 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 PLA2G6O60733 806 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 ZNF205O95201 554 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 RASGRP1O95267 797 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 ASLP04424 464 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 GOLGA8HP0CJ92 632 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 VAV1P15498 845 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 SLC16A2P36021 539 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 SLC1A4P43007 532 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 PSMC4P43686 418 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 SNAP25P60880 206 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 ZNF543Q08ER8 600 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 TROAPQ12815 778 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 TRDNQ13061 729 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 KCNT2Q6UVM3 1135 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 BTNL9Q6UXG8 535 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 CTU1Q7Z7A3 348 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 RALYLQ86SE5 291 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 TSPYL5Q86VY4 417 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 DDX42Q86XP3 938 aaKnown RBP eCLIP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 PPIL6Q8IXY8 311 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 PPM1KQ8N3J5 372 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 FAM181AQ8N9Y4 354 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 GPRC5AQ8NFJ5 357 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 ERO1AQ96HE7 468 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 NEK1Q96PY6 1258 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 SLF1Q9BQI6 1058 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 UBAC1Q9BSL1 405 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 PAGR1Q9BTK6 254 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 IRF2BPLQ9H1B7 796 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 CPVLQ9H3G5 476 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 TRIT1Q9H3H1 467 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 GPATCH2Q9NW75 528 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 TMEFF2Q9UIK5 374 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 FEM1BQ9UK73 627 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 GJD2Q9UKL4 321 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 GABRQQ9UN88 632 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 RIPK3Q9Y572 518 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 NPFFR2Q9Y5X5 522 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 ZNF536O15090 1300 aa9.29□□□□□ -0.92
ECHDC1-212ENST00000461239 DOCK3Q8IZD9 2030 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 TCRBV16S1A1N1A0A5B0 115 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 WASH4PA8MWX3 477 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 TAL1P17542 331 aaPredicted RBP9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 MCM5P33992 734 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 IGFALSP35858 605 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 NFKB2Q00653 900 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 GAB4Q2WGN9 574 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 CCDC178Q5BJE1 867 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms