RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 TIGD1Q96MW7 591 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 PLVAPQ9BX97 442 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 CDT1Q9H211 546 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 AAASQ9NRG9 546 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 KANSL3Q9P2N6 904 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 HOOK1Q9UJC3 728 aaKnown RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 USP20Q9Y2K6 914 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 ABLIM1O14639 778 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 EIF3DO15371 548 aaKnown RBP eCLIP12.11□□□□□ -0.47
APTX-209ENST00000460940 LAG3P18627 525 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 MCL1Q07820 350 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
APTX-209ENST00000460940 KYAT1Q16773 422 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 ZNF771Q7L3S4 317 aaPredicted RBP12.11□□□□□ -0.47
APTX-209ENST00000460940 TCHPQ9BT92 498 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 TSPY26PQ9H489 355 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 EXOC1Q9NV70 894 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
APTX-209ENST00000460940 ANKFY1Q9P2R3 1169 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 HES2Q9Y543 173 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
APTX-209ENST00000460940 FNDC1Q4ZHG4 1894 aaPredicted RBP12.11□□□□□ -0.47
APTX-209ENST00000460940 MEIS3P2A8K0S8 358 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 C5orf67F2Z3F1 127 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 CLDN3O15551 220 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 KINO60870 393 aaKnown RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 RB1P06400 928 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 MYBP10242 640 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 GRM5P41594 1212 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 PSMD2Q13200 908 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 POSTNQ15063 836 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 ZC2HC1CQ53FD0 456 aaPredicted RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 CREBRFQ8IUR6 639 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 TMEM192Q8IY95 271 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 ELOA2Q8IYF1 753 aaPredicted RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 ARNTL2Q8WYA1 636 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 APOL6Q9BWW8 343 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 TMEM63CQ9P1W3 806 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 ARL5CA6NH57 179 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 KLRC4O43908 158 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 RECQL4O94761 1208 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 CASP1P29466 404 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 CTNNB1P35222 781 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 BMPR1AP36894 532 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 MLH1P40692 756 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 CASP5P51878 434 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 DPYDQ12882 1025 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 EPC2Q52LR7 807 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 SLFN12LQ6IEE8 588 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 EPM2AIP1Q7L775 607 aaPredicted RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 RPS6KC1Q96S38 1066 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 C17orf80Q9BSJ5 609 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 C11orf84Q9BUA3 381 aaPredicted RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 TOPORSQ9NS56 1045 aaPredicted RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 TYW1Q9NV66 732 aaKnown RBP12.1□□□□□ -0.47
APTX-209ENST00000460940 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 PARP2Q9UGN5 583 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
APTX-209ENST00000460940 A0A0B4J269 797 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 SYCE3A1L190 88 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 NR1I2O75469 434 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
APTX-209ENST00000460940 AKAP5P24588 427 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 PPM1AP35813 382 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
APTX-209ENST00000460940 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
APTX-209ENST00000460940 RNASELQ05823 741 aaKnown RBP12.09□□□□□ -0.47
APTX-209ENST00000460940 GRIN2CQ14957 1233 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
APTX-209ENST00000460940 Q7L0L9 218 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 ZBTB33Q86T24 672 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 P2RX5Q93086 422 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 SYAP1Q96A49 352 aaPredicted RBP12.09□□□□□ -0.47
APTX-209ENST00000460940 GAD1Q99259 594 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 TSPYL1Q9H0U9 437 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 CWH43Q9H720 699 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 SNTG2Q9NY99 539 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 SZT2Q5T011 3432 aa12.09□□□□□ -0.47
APTX-209ENST00000460940 PRPF40AO75400 957 aaKnown RBP12.08□□□□□ -0.48
APTX-209ENST00000460940 SMC2O95347 1197 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 CLTAP09496 248 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 HARSP12081 509 aaKnown RBP12.08□□□□□ -0.48
APTX-209ENST00000460940 GRIK3Q13003 919 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 KCNB1Q14721 858 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms