RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 OS9Q13438 667 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 PCBP1Q15365 356 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 NTRK3Q16288 839 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 L1TD1Q5T7N2 865 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 TSHZ3Q63HK5 1081 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 HHIPL2Q6UWX4 724 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 DLK2Q6UY11 383 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 CPNE8Q86YQ8 564 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 RTKN2Q8IZC4 609 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 TMEM145Q8NBT3 493 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 COPS5Q92905 334 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 EAF2Q96CJ1 260 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 TRIM44Q96DX7 344 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 SCLYQ96I15 445 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 FAM84BQ96KN1 310 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 MAGEB10Q96LZ2 347 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 NEUROD6Q96NK8 337 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 NOX5Q96PH1 765 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 RTFDC1Q9BY42 306 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 CCDC8Q9H0W5 538 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 BCAS3Q9H6U6 928 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 RXFP1Q9HBX9 757 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 PCDH18Q9HCL0 1135 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 SPATA6Q9NWH7 488 aaPredicted RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 PCDHAC2Q9Y5I4 1007 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 AOX1Q06278 1338 aa5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 DICER1Q9UPY3 1922 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-203ENST00000460928 A0A1B0GUL7 405 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 GOLGA6L3A6NEY3 463 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 PDE8BO95263 885 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 EYA4O95677 639 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 SCG5P05408 212 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 FGFR2P21802 821 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 ECI1P42126 302 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 SARSP49591 514 aaKnown RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 GUCY2FP51841 1108 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 CXCL9Q07325 125 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 SLC20A2Q08357 652 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 KIAA2012Q0VF49 1180 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 CHAF1AQ13111 956 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 ATP2B3Q16720 1220 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 PRSS53Q2L4Q9 553 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 ZXDCQ2QGD7 858 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 MAMDC2Q7Z304 686 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 ZNF761Q86XN6 746 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 PLEKHO2Q8TD55 490 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 SECISBP2LQ93073 1101 aaKnown RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 PSMD1Q99460 953 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 MMP19Q99542 508 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 ANKRD2Q9GZV1 360 aa5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 SCAF8Q9UPN6 1271 aaKnown RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 COL1A1P02452 1464 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-203ENST00000460928 SZT2Q5T011 3432 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 ADAMTSL1Q8N6G6 1762 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 PSMD14O00487 310 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 CIAO1O76071 339 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 CHGBP05060 677 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 CYP2C8P10632 490 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 VEGFAP15692 232 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 IGFALSP35858 605 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 FLT3P36888 993 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 IL15P40933 162 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 SETQ01105 290 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 MAP2K1Q02750 393 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 STRN3Q13033 797 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 ZNF460Q14592 562 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 SLC35F1Q5T1Q4 408 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 USP53Q70EK8 1073 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 AACSQ86V21 672 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 DCP2Q8IU60 420 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 RPAP2Q8IXW5 612 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 CERS5Q8N5B7 392 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 USP33Q8TEY7 942 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 EDC3Q96F86 508 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 C1orf159Q96HA4 380 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 TMX4Q9H1E5 349 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 CD209Q9NNX6 404 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 DBNLQ9UJU6 430 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 MYRFQ9Y2G1 1151 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 TRAF6Q9Y4K3 522 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 DUSP10Q9Y6W6 482 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 FPGT-TNNI3KV9GXZ4 949 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 ZNF646O15015 1829 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 MYO5AQ9Y4I1 1855 aaKnown RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 ASTN2O75129 1339 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 MROH5Q6ZUA9 1318 aa5.68□□□□□ -1.5
ATPAF1-203ENST00000460928 COL6A3P12111 3177 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 ZNF609O15014 1411 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 TCRBV16S1A1N1A0A5B0 115 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 FZD9O00144 591 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 KPNA6O60684 536 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 MAP4K4O95819 1239 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 ITGB3P05106 788 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 JMJD7P0C870 316 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 HIBADHP31937 336 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 CNR2P34972 360 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 EPS15P42566 896 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 GMPSP49915 693 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 FXR1P51114 621 aaKnown RBP eCLIP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms