RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 FMO5P49326 533 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
CSDC2-202ENST00000460790 CLDN10P78369 228 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 PPP3CAQ08209 521 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 KCNMA1Q12791 1236 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 TBX2Q13207 712 aaPredicted RBP11.84□□□□□ -0.51
CSDC2-202ENST00000460790 BFSP2Q13515 415 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 DCAF4L1Q3SXM0 396 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 SEZ6Q53EL9 994 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 SPECC1LQ69YQ0 1117 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 CCDC155Q8N6L0 562 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
CSDC2-202ENST00000460790 CCDC51Q96ER9 411 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 OSBPL7Q9BZF2 842 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 AGO3Q9H9G7 860 aaKnown RBP11.84□□□□□ -0.51
CSDC2-202ENST00000460790 ERVK-5Q9HDB9 667 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 RBAKQ9NYW8 714 aaPredicted RBP11.84□□□□□ -0.51
CSDC2-202ENST00000460790 ST3GAL5Q9UNP4 418 aa11.84□□□□□ -0.51
CSDC2-202ENST00000460790 GTPBP10A4D1E9 387 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 DCDC2CA8MYV0 355 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 P4HA2O15460 535 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 PQBP1O60828 265 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 NPTXRO95502 500 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 STAG3L1P0CL83 205 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 GTF2H1P32780 548 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 GRM5P41594 1212 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 WNT7BP56706 349 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 TLE2Q04725 743 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 NFX1Q12986 1120 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 LPIN1Q14693 890 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 SYCP1Q15431 976 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 SURF1Q15526 300 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 UBXN11Q5T124 520 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 CEP120Q8N960 986 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 CCDC127Q96BQ5 260 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 PAWRQ96IZ0 340 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 POP1Q99575 1024 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 EIF2AQ9BY44 585 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 RPF1Q9H9Y2 349 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 PADI3Q9ULW8 664 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 SIK3Q9Y2K2 1263 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSDC2-202ENST00000460790 TET1Q8NFU7 2136 aa11.83□□□□□ -0.52
CSDC2-202ENST00000460790 GOLGA6L6A8MZA4 724 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
CSDC2-202ENST00000460790 IL18RAPO95256 599 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 DLATP10515 647 aaKnown RBP11.82□□□□□ -0.52
CSDC2-202ENST00000460790 GHRP10912 638 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 SELPP16109 830 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 CD52P31358 61 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 GCLMP48507 274 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 KLK7P49862 253 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 OSTNP61366 133 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 ENOX2Q16206 610 aaKnown RBP11.82□□□□□ -0.52
CSDC2-202ENST00000460790 TRIM60Q495X7 471 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 CBWD6Q4V339 395 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 CBWD3Q5JTY5 395 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 CBWD5Q5RIA9 395 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 DPY19L2P1Q6NXN4 242 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 GBP6Q6ZN66 633 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 NECAB2Q7Z6G3 386 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 TMEM192Q8IY95 271 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 ACAP3Q96P50 834 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 FNBP1Q96RU3 617 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 CRACR2AQ9BSW2 395 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 NUP58Q9BVL2 599 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 TMEM117Q9H0C3 514 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 TMEM8AQ9HCN3 771 aa11.82□□□□□ -0.52
CSDC2-202ENST00000460790 PDCD11Q14690 1871 aaKnown RBP11.82□□□□□ -0.52
CSDC2-202ENST00000460790 SCN5AQ14524 2016 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 RALGAPA2Q2PPJ7 1873 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 TTC26A0AVF1 554 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 LACTBL1A8MY62 500 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 MEFVO15553 781 aaPredicted RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 ZSCAN20P17040 1043 aaPredicted RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 TNNI1P19237 187 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 PON1P27169 355 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 AP3M2P53677 418 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 CETN1Q12798 172 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 PAK2Q13177 524 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 DSC3Q14574 896 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 MBTPS1Q14703 1052 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 EXOC3L4Q17RC7 722 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 SLC10A6Q3KNW5 377 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 FIGNQ5HY92 759 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 KRT39Q6A163 491 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 TWF2Q6IBS0 349 aaKnown RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 C15orf39Q6ZRI6 1047 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 FAM43BQ6ZT52 329 aaPredicted RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 SV2AQ7L0J3 742 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms