RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 TMEM132DQ14C87 1099 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DBN1Q16643 649 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TBC1D25Q3MII6 688 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CCDC62Q6P9F0 684 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CAPNS2Q96L46 248 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DNAJC7Q99615 494 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FTHL17Q9BXU8 183 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SIPA1L3O60292 1781 aaPredicted RBP6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 WDR19Q8NEZ3 1342 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AP3B1O00203 1094 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MFAP3LO75121 409 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VIL1P09327 827 aaKnown RBP6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TXNP10599 105 aaKnown RBP6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PCSK1P29120 753 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BTG3Q14201 252 aaPredicted RBP6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ALX1Q15699 326 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PPM1LQ5SGD2 360 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RASIP1Q5U651 963 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PRAMEF18Q5VWM3 479 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KSR1Q8IVT5 923 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NELFCDQ8IXH7 590 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MYOCDQ8IZQ8 938 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EID3Q8N140 333 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HOMER3Q9NSC5 361 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 INTS9Q9NV88 658 aaKnown RBP6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TJP2Q9UDY2 1190 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AMFRQ9UKV5 643 aa6.65□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TNS1Q9HBL0 1735 aaKnown RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VSTM5A8MXK1 200 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GYG1P46976 350 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MFAP3P55082 362 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DCAF4L1Q3SXM0 396 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ACCSLQ4AC99 568 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF365Q70YC5 407 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TBC1D1Q86TI0 1168 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SCN4BQ8IWT1 228 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM178BQ8IXR5 827 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FMR1NBQ8N0W7 255 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC4A9Q96Q91 983 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NHEJ1Q9H9Q4 299 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CTTNBP2NLQ9P2B4 639 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NOVA2Q9UNW9 492 aaKnown RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CLCA2Q9UQC9 943 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF532Q9HCE3 1301 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ITGAXP20702 1163 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PNPLA4P41247 253 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VSNL1P62760 191 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LMNB2Q03252 620 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ORC2Q13416 577 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TMC7Q7Z402 723 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AHCYL2Q96HN2 611 aaKnown RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLITRK1Q96PX8 696 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZSCAN10Q96SZ4 725 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VCX3BQ9H321 246 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RMI1Q9H9A7 625 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DDX25Q9UHL0 483 aaKnown RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GPN3Q9UHW5 284 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FHOD1Q9Y613 1164 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KIF3CO14782 793 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DYNC1LI2O43237 492 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 UPP2O95045 317 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HMGCRP04035 888 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KRT15P19012 456 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ADD2P35612 726 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ETFBP38117 255 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RFC5P40937 340 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PPP4CP60510 307 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TGM3Q08188 693 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ARHGEF7Q14155 803 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PRR16Q569H4 304 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 POMGNT1Q8WZA1 660 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GSDMAQ96QA5 445 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TUBGCP2Q9BSJ2 902 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HCN3Q9P1Z3 774 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ANKRD36CQ5JPF3 1778 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RSPH10B2B2RC85 870 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HNRNPDLO14979 420 aaKnown RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FOXD2O60548 495 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 OPHN1O60890 802 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RSPH10BP0C881 870 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC2A4P14672 509 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 POLE2P56282 527 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ILF2Q12905 390 aaKnown RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NYAP1Q6ZVC0 841 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PHLDB2Q86SQ0 1253 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HERC6Q8IVU3 1022 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 U2AF1L4Q8WU68 220 aaKnown RBP6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KLHL29Q96CT2 875 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TRPC7Q9HCX4 862 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PALMDQ9NP74 551 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KLC4Q9NSK0 619 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GIMAP4Q9NUV9 329 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 STOML1Q9UBI4 398 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TTLL3Q9Y4R7 772 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BRWD3Q6RI45 1802 aa6.64□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CES2O00748 559 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC26A4O43511 780 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms