RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 FAM186BQ8IYM0 893 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 PHOSPHO2Q8TCD6 241 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 URGCPQ8TCY9 931 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 FBXL18Q96ME1 805 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 RPS6KC1Q96S38 1066 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 CBWD1Q9BRT8 395 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 FAM213AQ9BRX8 229 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 SLC38A7Q9NVC3 462 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 PARP2Q9UGN5 583 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 ARMCX3Q9UH62 379 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-206ENST00000460235 IPPQ9Y573 584 aa13.43□□□□□ -0.26
HDAC4-206ENST00000460235 ZBBXA8MT70 800 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 C9IYK1 514 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 TPM3P06753 285 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 SYN1P17600 705 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 ADSSP30520 456 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 MLLT1Q03111 559 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-206ENST00000460235 EEF1DP3Q658K8 133 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 SLC39A4Q6P5W5 647 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 TMC2Q8TDI7 906 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 ZBTB45Q96K62 511 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-206ENST00000460235 MRPL9Q9BYD2 267 aaKnown RBP13.42□□□□□ -0.26
HDAC4-206ENST00000460235 TMX1Q9H3N1 280 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 PCIF1Q9H4Z3 704 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 RBAKQ9NYW8 714 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-206ENST00000460235 DERAQ9Y315 318 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 NFE2L3Q9Y4A8 694 aa13.42□□□□□ -0.26
HDAC4-206ENST00000460235 N4BP1O75113 896 aaKnown RBP13.41□□□□□ -0.26
HDAC4-206ENST00000460235 ITGB8P26012 769 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 GPNMBQ14956 572 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 FILIP1LQ4L180 1135 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 UBXN11Q5T124 520 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 C11orf57Q6ZUT1 292 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-206ENST00000460235 ZNF365Q70YC5 407 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 CREBRFQ8IUR6 639 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 BRSK2Q8IWQ3 736 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
HDAC4-206ENST00000460235 RNF169Q8NCN4 708 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 HERVK_113Q902F9 699 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 SLC9A7Q96T83 725 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 RSAD1Q9HA92 442 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 CPSF3Q9UKF6 684 aaKnown RBP13.41□□□□□ -0.26
HDAC4-206ENST00000460235 SLC4A7Q9Y6M7 1214 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 TANC1Q9C0D5 1861 aa13.41□□□□□ -0.26
HDAC4-206ENST00000460235 TRIM49BA6NDI0 452 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 ABLIM1O14639 778 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 PAX3P23760 479 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 GTF2H1P32780 548 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 MTIF2P46199 727 aaKnown RBP13.4□□□□□ -0.26
HDAC4-206ENST00000460235 ACOT2P49753 483 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 MARSP56192 900 aaKnown RBP13.4□□□□□ -0.26
HDAC4-206ENST00000460235 PSMD6Q15008 389 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 CDR2LQ86X02 465 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-206ENST00000460235 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 FAM212AQ96EL1 285 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 SAAL1Q96ER3 474 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 FAM193BQ96PV7 902 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-206ENST00000460235 DUSP9Q99956 384 aaKnown RBP13.4□□□□□ -0.26
HDAC4-206ENST00000460235 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 APOL6Q9BWW8 343 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 EIF2AQ9BY44 585 aaKnown RBP13.4□□□□□ -0.26
HDAC4-206ENST00000460235 SNTG2Q9NY99 539 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 C2CD2Q9Y426 696 aa13.4□□□□□ -0.26
HDAC4-206ENST00000460235 SIP14410 1827 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-206ENST00000460235 MGEA5O60502 916 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 RECQL4O94761 1208 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TNNC2P02585 160 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 THP07101 528 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 ACRP10323 421 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TNNI1P19237 187 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 VAMP7P51809 220 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
HDAC4-206ENST00000460235 OSTNP61366 133 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
HDAC4-206ENST00000460235 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 BFSP1Q12934 665 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 DUOXA2Q1HG44 320 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TMEM240Q5SV17 173 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 LRRC55Q6ZSA7 311 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 OTOP2Q7RTS6 562 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 WDR49Q8IV35 697 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 RDH13Q8NBN7 331 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 CCDC150Q8NCX0 1101 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 SMG8Q8ND04 991 aaKnown RBP13.39□□□□□ -0.27
HDAC4-206ENST00000460235 BEST2Q8NFU1 509 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TOP1MTQ969P6 601 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 ANKRD36BP1Q96IX9 119 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 UBE2OQ9C0C9 1292 aaKnown RBP13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TMEM117Q9H0C3 514 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
HDAC4-206ENST00000460235 CBX8Q9HC52 389 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 USP20Q9Y2K6 914 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDAC4-206ENST00000460235 CENPFP49454 3210 aa13.39□□□□□ -0.27
HDAC4-206ENST00000460235 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms