RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SYCP3Q8IZU3 236 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 FUKQ8N0W3 1084 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 C2orf69Q8N8R5 385 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 PRELID2Q8N945 189 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 XXYLT1Q8NBI6 393 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 BBOF1Q8ND07 529 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 RDM1Q8NG50 284 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 OR2W6PQ8NHA6 318 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CCHCR1Q8TD31 782 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 GRK7Q8WTQ7 553 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ATXN2LQ8WWM7 1075 aaKnown RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 SHC3Q92529 594 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ALG3Q92685 438 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 KIFAP3Q92845 792 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 KCNN1Q92952 543 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 RNF25Q96BH1 459 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ZBTB9Q96C00 473 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ARHGEF26Q96DR7 871 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 TRIM11Q96F44 468 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CCDC114Q96M63 670 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 MYCBPQ99417 103 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 MXRA8Q9BRK3 442 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ZNF577Q9BSK1 485 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CELF4Q9BZC1 486 aaKnown RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 MAF1Q9H063 256 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 DPH5Q9H2P9 285 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ADAM7Q9H2U9 754 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CENPHQ9H3R5 247 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 C17orf75Q9HAS0 396 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 SLC40A1Q9NP59 571 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 AVENQ9NQS1 362 aaPredicted RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 GINM1Q9NU53 330 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 RGL1Q9NZL6 768 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 CTTNBP2NLQ9P2B4 639 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 KCNG1Q9UIX4 513 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 NOCTQ9UK39 431 aaKnown RBP6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 FEM1BQ9UK73 627 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 COG5Q9UP83 839 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 EXOC7Q9UPT5 735 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ATP8A1Q9Y2Q0 1164 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 ACTL7BQ9Y614 415 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 COL4A5P29400 1685 aa6.58□□□□□ -1.36
UBQLN4-202ENST00000459954 EMSYQ7Z589 1322 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 VGLL3A8MV65 326 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 O00370 1275 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 DNM1LO00429 736 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 RIPK2O43353 540 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 CTNND1O60716 968 aaKnown RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 HIP1RO75146 1068 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 MYBL1P10243 752 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 PLS3P13797 630 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 CHN1P15882 459 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 ABCB4P21439 1286 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 TMOD1P28289 359 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 ECE1P42892 770 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 RPL21P46778 160 aaKnown RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 SCTRP47872 440 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 PDE6CP51160 858 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 CYP2J2P51589 502 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 GPC3P51654 580 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 HSD17B4P51659 736 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 HIRAP54198 1017 aaPredicted RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 PLTPP55058 493 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 RWDD2BP57060 319 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 IKQ13123 557 aaPredicted RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 SLC29A2Q14542 456 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 SIX1Q15475 284 aaPredicted RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 SNCBQ16143 134 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 QPCTQ16769 361 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 SKIDA1Q1XH10 827 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 USH1GQ495M9 461 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 TBC1D10BQ4KMP7 808 aaPredicted RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 ZC2HC1CQ53FD0 456 aaPredicted RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 DCAF15Q66K64 600 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 ACAD10Q6JQN1 1059 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 CYB5D1Q6P9G0 228 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 RHBDF2Q6PJF5 856 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 CCDC137Q6PK04 289 aaKnown RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 PADI6Q6TGC4 694 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 SAMD7Q7Z3H4 446 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 GPIHBP1Q8IV16 184 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 PARP9Q8IXQ6 854 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 C4orf19Q8IY42 314 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 DAW1Q8N136 415 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 RIBC1Q8N443 379 aaPredicted RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 FBXO25Q8TCJ0 367 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 EPS8L1Q8TE68 723 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 PIGOQ8TEQ8 1089 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 FAM151AQ8WW52 585 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 GRAMD1AQ96CP6 724 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 TRIM51Q9BSJ1 452 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 UNC45AQ9H3U1 944 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 GOLPH3Q9H4A6 298 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 PPCSQ9HAB8 311 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 ERVK-5Q9HDB9 667 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 UBE2TQ9NPD8 197 aaPredicted RBP6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 ANKEF1Q9NU02 776 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 TBC1D22BQ9NU19 505 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 SAMD15Q9P1V8 674 aa6.57□□□□□ -1.36
UBQLN4-202ENST00000459954 NR2E1Q9Y466 385 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms