RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 WASF1Q92558 559 aa11.57□□□□□ -0.56
HDLBP-227ENST00000458564 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
HDLBP-227ENST00000458564 PIDD1Q9HB75 910 aa11.57□□□□□ -0.56
HDLBP-227ENST00000458564 FBXW11Q9UKB1 542 aa11.57□□□□□ -0.56
HDLBP-227ENST00000458564 CA14Q9ULX7 337 aa11.57□□□□□ -0.56
HDLBP-227ENST00000458564 PCDHA12Q9UN75 941 aa11.57□□□□□ -0.56
HDLBP-227ENST00000458564 NUMBLQ9Y6R0 609 aa11.57□□□□□ -0.56
HDLBP-227ENST00000458564 MTCL1Q9Y4B5 1905 aaKnown RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 CTDNEP1O95476 244 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 NPTXRO95502 500 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 HNRNPA1P09651 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 MYBP10242 640 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 XRCC6P12956 609 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 RFX1P22670 979 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 KRT2P35908 639 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 NR5A1Q13285 461 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 TUSC3Q13454 348 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 CALCRLQ16602 461 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 FAM187BQ17R55 369 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 RTP2Q5QGT7 225 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 ZC3H14Q6PJT7 736 aaKnown RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 CCDC43Q96MW1 224 aaKnown RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 TTPALQ9BTX7 342 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 POLR3FQ9H1D9 316 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 TTC12Q9H892 705 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 PRMT7Q9NVM4 692 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 ORC3Q9UBD5 711 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
HDLBP-227ENST00000458564 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 SIT1Q9Y3P8 196 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 GPR179Q6PRD1 2367 aa11.56□□□□□ -0.56
HDLBP-227ENST00000458564 CEP250Q9BV73 2442 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 STK25O00506 426 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 NEMFO60524 1076 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 TADA2AO75478 443 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 KIF4AO95239 1232 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 RPL17P18621 184 aaKnown RBP11.55□□□□□ -0.56
HDLBP-227ENST00000458564 FSHRP23945 695 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 STARD6P59095 220 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 NAB2Q15742 525 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 PDXDC1Q6P996 788 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 DCLRE1AQ6PJP8 1040 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 CDR2LQ86X02 465 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-227ENST00000458564 C1orf210Q8IVY1 113 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 MCPH1Q8NEM0 835 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 PJA1Q8NG27 643 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 SHDQ96IW2 340 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 MTMR9Q96QG7 549 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 CLSTN3Q9BQT9 956 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 PAAF1Q9BRP4 392 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 DDX23Q9BUQ8 820 aaKnown RBP11.55□□□□□ -0.56
HDLBP-227ENST00000458564 FZD8Q9H461 694 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 PARP2Q9UGN5 583 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 CDH7Q9ULB5 785 aa11.55□□□□□ -0.56
HDLBP-227ENST00000458564 LRRIQ4A6NIV6 560 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 PTGESO14684 152 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 N4BP3O15049 544 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 USO1O60763 962 aaKnown RBP11.54□□□□□ -0.56
HDLBP-227ENST00000458564 DCNP07585 359 aaKnown RBP11.54□□□□□ -0.56
HDLBP-227ENST00000458564 SP9P0CG40 484 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 FDPSP14324 419 aaKnown RBP11.54□□□□□ -0.56
HDLBP-227ENST00000458564 ELAVL2Q12926 359 aaKnown RBP11.54□□□□□ -0.56
HDLBP-227ENST00000458564 PSMD5Q16401 504 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 PRSS55Q6UWB4 352 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-227ENST00000458564 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 RTL10Q7L3V2 364 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 GRASPQ7Z6J2 395 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-227ENST00000458564 GLYCTKQ8IVS8 523 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 LNX1Q8TBB1 728 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-227ENST00000458564 PIGOQ8TEQ8 1089 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 RABGGTAQ92696 567 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 FGF14Q92915 247 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 C2orf40Q9H1Z8 148 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 PDZD7Q9H5P4 517 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 GPRC5CQ9NQ84 441 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 CACNG4Q9UBN1 327 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 R4GN57 208 aa11.54□□□□□ -0.56
HDLBP-227ENST00000458564 FANCMQ8IYD8 2048 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 CASTOR2A6NHX0 329 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 POTEMA6NI47 508 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 TMEM189-UBE2V1I3L0A0 370 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 WNT7AO00755 349 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 XYLBO75191 536 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 RECQL4O94761 1208 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 THP07101 528 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 C8AP07357 584 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 GLULP15104 373 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 RBM25P49756 843 aaKnown RBP11.53□□□□□ -0.56
HDLBP-227ENST00000458564 ANAPC15P60006 121 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 ANKRD1Q15327 319 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 PPM1LQ5SGD2 360 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 FAM171A1Q5VUB5 890 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 PARM1Q6UWI2 310 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-227ENST00000458564 ZBTB8OSQ8IWT0 167 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms