RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 IFIT1P09914 478 aaKnown RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 MTHFD1P11586 935 aaKnown RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 ATF2P15336 505 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 CD9P21926 228 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 KCNJ4P48050 445 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 AP2B1P63010 937 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 RBM6P78332 1123 aaKnown RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 PLP2Q04941 152 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 IKQ13123 557 aaPredicted RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 PAK2Q13177 524 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 RAB33AQ14088 237 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 SLC9A5Q14940 896 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 SPDYCQ5MJ68 293 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 TTC19Q6DKK2 380 aaPredicted RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 BTNL9Q6UXG8 535 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 RUFY4Q6ZNE9 571 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 CCDC91Q7Z6B0 441 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 MYLK4Q86YV6 388 aaPredicted RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 ADGRG2Q8IZP9 1017 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 MAGEB6Q8N7X4 407 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 NAXEQ8NCW5 288 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 FAM76AQ8TAV0 307 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 FNIP1Q8TF40 1166 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 NUDT16L1Q9BRJ7 211 aaKnown RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 PAPOLBQ9NRJ5 636 aaKnown RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 AASDHPPTQ9NRN7 309 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 BLOC1S4Q9NUP1 217 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 OBP2AQ9NY56 170 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 CHMP5Q9NZZ3 219 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS41-209ENST00000457055 AGTPBP1Q9UPW5 1226 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 TMX2Q9Y320 296 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 MLH3Q9UHC1 1453 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 SYNMO15061 1565 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 A0A1B0GTL3 188 aa6□□□□□ -1.45
VPS41-209ENST00000457055 ANO9A1A5B4 782 aa6□□□□□ -1.45
VPS41-209ENST00000457055 VSTM5A8MXK1 200 aa6□□□□□ -1.45
VPS41-209ENST00000457055 INO80B-WBP1J3KQ70 363 aa6□□□□□ -1.45
VPS41-209ENST00000457055 FYB1O15117 783 aa6□□□□□ -1.45
VPS41-209ENST00000457055 KLHL41O60662 606 aa6□□□□□ -1.45
VPS41-209ENST00000457055 TBCAO75347 108 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 TIPRLO75663 272 aa6□□□□□ -1.45
VPS41-209ENST00000457055 GFPT2O94808 682 aa6□□□□□ -1.45
VPS41-209ENST00000457055 MBD4O95243 580 aa6□□□□□ -1.45
VPS41-209ENST00000457055 STAMBPO95630 424 aa6□□□□□ -1.45
VPS41-209ENST00000457055 FGFR1OPO95684 399 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 SLC4A1P02730 911 aa6□□□□□ -1.45
VPS41-209ENST00000457055 HSPA1AP0DMV8 641 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 HSPA1BP0DMV9 641 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 ATP6V1B1P15313 513 aa6□□□□□ -1.45
VPS41-209ENST00000457055 GNAT2P19087 354 aa6□□□□□ -1.45
VPS41-209ENST00000457055 TMOD1P28289 359 aa6□□□□□ -1.45
VPS41-209ENST00000457055 HOXD12P35452 270 aa6□□□□□ -1.45
VPS41-209ENST00000457055 MC3RP41968 323 aa6□□□□□ -1.45
VPS41-209ENST00000457055 MAPK9P45984 424 aa6□□□□□ -1.45
VPS41-209ENST00000457055 KIF11P52732 1056 aa6□□□□□ -1.45
VPS41-209ENST00000457055 LIMK1P53667 647 aa6□□□□□ -1.45
VPS41-209ENST00000457055 IFRD2Q12894 506 aaPredicted RBP6□□□□□ -1.45
VPS41-209ENST00000457055 PPP2R5DQ14738 602 aa6□□□□□ -1.45
VPS41-209ENST00000457055 RTP5Q14D33 572 aa6□□□□□ -1.45
VPS41-209ENST00000457055 ARHGEF6Q15052 776 aa6□□□□□ -1.45
VPS41-209ENST00000457055 TCEA2Q15560 299 aa6□□□□□ -1.45
VPS41-209ENST00000457055 CRTC1Q6UUV9 634 aa6□□□□□ -1.45
VPS41-209ENST00000457055 LIPIQ6XZB0 460 aa6□□□□□ -1.45
VPS41-209ENST00000457055 OTOP3Q7RTS5 596 aa6□□□□□ -1.45
VPS41-209ENST00000457055 TEX11Q8IYF3 940 aa6□□□□□ -1.45
VPS41-209ENST00000457055 THEMISQ8N1K5 641 aaPredicted RBP6□□□□□ -1.45
VPS41-209ENST00000457055 LSMEM1Q8N8F7 131 aa6□□□□□ -1.45
VPS41-209ENST00000457055 RBBP8NLQ8NC74 664 aaPredicted RBP6□□□□□ -1.45
VPS41-209ENST00000457055 IL17REQ8NFR9 667 aa6□□□□□ -1.45
VPS41-209ENST00000457055 ALG3Q92685 438 aa6□□□□□ -1.45
VPS41-209ENST00000457055 BICD1Q96G01 975 aa6□□□□□ -1.45
VPS41-209ENST00000457055 TNIP3Q96KP6 325 aa6□□□□□ -1.45
VPS41-209ENST00000457055 PPM1MQ96MI6 270 aa6□□□□□ -1.45
VPS41-209ENST00000457055 IPO9Q96P70 1041 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 SMAD5Q99717 465 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 SPATA25Q9BR10 227 aa6□□□□□ -1.45
VPS41-209ENST00000457055 ATP6V0A4Q9HBG4 840 aa6□□□□□ -1.45
VPS41-209ENST00000457055 TBC1D22BQ9NU19 505 aa6□□□□□ -1.45
VPS41-209ENST00000457055 USP40Q9NVE5 1235 aa6□□□□□ -1.45
VPS41-209ENST00000457055 PSD3Q9NYI0 1048 aa6□□□□□ -1.45
VPS41-209ENST00000457055 NKIRAS2Q9NYR9 191 aa6□□□□□ -1.45
VPS41-209ENST00000457055 WDR35Q9P2L0 1181 aa6□□□□□ -1.45
VPS41-209ENST00000457055 ZNF214Q9UL59 606 aaPredicted RBP6□□□□□ -1.45
VPS41-209ENST00000457055 TMEM98Q9Y2Y6 226 aa6□□□□□ -1.45
VPS41-209ENST00000457055 RRP7AQ9Y3A4 280 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 R3HCC1Q9Y3T6 440 aaKnown RBP6□□□□□ -1.45
VPS41-209ENST00000457055 ANGPTL3Q9Y5C1 460 aa6□□□□□ -1.45
VPS41-209ENST00000457055 MED14O60244 1454 aa6□□□□□ -1.45
VPS41-209ENST00000457055 CDK12Q9NYV4 1490 aaPredicted RBP6□□□□□ -1.45
VPS41-209ENST00000457055 ARHGAP5Q13017 1502 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 DEPDC5O75140 1603 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 LRP5O75197 1615 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 COL16A1Q07092 1604 aaPredicted RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 A0A087WZG4 1122 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 PLOD2O00469 737 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 PRPF3O43395 683 aaKnown RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 KLF4O43474 513 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 PRICKLE3O43900 615 aaPredicted RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 KATNA1O75449 491 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms