RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 AMPD3Q01432 767 aa25.4■■□□□ 1.66
CBX3-204ENST00000456948 COL19A1Q14993 1142 aa25.4■■□□□ 1.66
CBX3-204ENST00000456948 COLGALT2Q8IYK4 626 aa25.4■■□□□ 1.66
CBX3-204ENST00000456948 IQUBQ8NA54 791 aa25.4■■□□□ 1.66
CBX3-204ENST00000456948 KCNN1Q92952 543 aa25.4■■□□□ 1.66
CBX3-204ENST00000456948 PYM1Q9BRP8 204 aaKnown RBP25.4■■□□□ 1.66
CBX3-204ENST00000456948 SEL1LQ9UBV2 794 aa25.4■■□□□ 1.66
CBX3-204ENST00000456948 CLDN3O15551 220 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 GAP43P17677 238 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 DSC1Q08554 894 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 ADAM15Q13444 863 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 PKP1Q13835 747 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 CTC1Q2NKJ3 1217 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 PDILTQ8N807 584 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 MRPL43Q8N983 215 aaKnown RBP25.39■■□□□ 1.66
CBX3-204ENST00000456948 NECAB3Q96P71 396 aaPredicted RBP25.39■■□□□ 1.66
CBX3-204ENST00000456948 PTPRHQ9HD43 1115 aa25.39■■□□□ 1.66
CBX3-204ENST00000456948 PRG3Q9Y2Y8 225 aaPredicted RBP25.39■■□□□ 1.66
CBX3-204ENST00000456948 SPTBN5Q9NRC6 3674 aaKnown RBP25.39■■□□□ 1.65
CBX3-204ENST00000456948 TDRD15B5MCY1 1934 aaKnown RBP25.39■■□□□ 1.65
CBX3-204ENST00000456948 BRD1O95696 1058 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 EDN1P05305 212 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 GRM5P41594 1212 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 LIG4P49917 911 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 KRT85P78386 507 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 DNM1Q05193 864 aaKnown RBP25.38■■□□□ 1.65
CBX3-204ENST00000456948 TUSC3Q13454 348 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 KYAT1Q16773 422 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 DYMQ7RTS9 669 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 TAS1R3Q7RTX0 852 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 ADGRD2Q7Z7M1 963 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 ZBTB33Q86T24 672 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 LRRC15Q8TF66 581 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 DDX12PQ92771 950 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 ACAP3Q96P50 834 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 CDT1Q9H211 546 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 MIOSQ9NXC5 875 aa25.38■■□□□ 1.65
CBX3-204ENST00000456948 CTSAP10619 480 aa25.37■■□□□ 1.65
CBX3-204ENST00000456948 DUSP6Q16828 381 aa25.37■■□□□ 1.65
CBX3-204ENST00000456948 GSTCDQ8NEC7 633 aa25.37■■□□□ 1.65
CBX3-204ENST00000456948 ANKFY1Q9P2R3 1169 aa25.37■■□□□ 1.65
CBX3-204ENST00000456948 RCOR1Q9UKL0 485 aa25.37■■□□□ 1.65
CBX3-204ENST00000456948 TBX20Q9UMR3 447 aa25.37■■□□□ 1.65
CBX3-204ENST00000456948 HNRNPDLO14979 420 aaKnown RBP25.36■■□□□ 1.65
CBX3-204ENST00000456948 PER2O15055 1255 aa25.36■■□□□ 1.65
CBX3-204ENST00000456948 PROZP22891 400 aa25.36■■□□□ 1.65
CBX3-204ENST00000456948 NOLC1Q14978 699 aaKnown RBP eCLIP25.36■■□□□ 1.65
CBX3-204ENST00000456948 EMILIN2Q9BXX0 1053 aa25.36■■□□□ 1.65
CBX3-204ENST00000456948 ZBP1Q9H171 429 aa25.36■■□□□ 1.65
CBX3-204ENST00000456948 TNMDQ9H2S6 317 aa25.36■■□□□ 1.65
CBX3-204ENST00000456948 MRPL17Q9NRX2 175 aaKnown RBP25.36■■□□□ 1.65
CBX3-204ENST00000456948 SLC38A7Q9NVC3 462 aa25.36■■□□□ 1.65
CBX3-204ENST00000456948 IRAK3Q9Y616 596 aa25.36■■□□□ 1.65
CBX3-204ENST00000456948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.35■■□□□ 1.65
CBX3-204ENST00000456948 MYMKA6NI61 221 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 H3BQ06 376 aaPredicted RBP25.35■■□□□ 1.65
CBX3-204ENST00000456948 TADA2AO75478 443 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 HARSP12081 509 aaKnown RBP25.35■■□□□ 1.65
CBX3-204ENST00000456948 IDEP14735 1019 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 PTCRAQ6ISU1 281 aaPredicted RBP25.35■■□□□ 1.65
CBX3-204ENST00000456948 KIAA1841Q6NSI8 718 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 PPFIBP1Q86W92 1011 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 TMEM173Q86WV6 379 aaPredicted RBP25.35■■□□□ 1.65
CBX3-204ENST00000456948 HVCN1Q96D96 273 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 ST6GALNAC4Q9H4F1 302 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 MRPL44Q9H9J2 332 aaKnown RBP25.35■■□□□ 1.65
CBX3-204ENST00000456948 MAGEF1Q9HAY2 307 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 PCDHA7Q9UN72 937 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 PCDHGC5Q9Y5F6 944 aa25.35■■□□□ 1.65
CBX3-204ENST00000456948 C2orf71A6NGG8 1288 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 HIDE1A8MVS5 230 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 SOD2P04179 222 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 URODP06132 367 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 GTF2F1P35269 517 aaKnown RBP eCLIP25.34■■□□□ 1.65
CBX3-204ENST00000456948 OSTNP61366 133 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 GTF2BQ00403 316 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 CCDC65Q8IXS2 484 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 SPATA32Q96LK8 384 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 UROC1Q96N76 676 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 SCAND2PQ9GZW5 306 aaPredicted RBP25.34■■□□□ 1.65
CBX3-204ENST00000456948 CD207Q9UJ71 328 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 EXOC7Q9UPT5 735 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 PCDHB13Q9Y5F0 798 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.34■■□□□ 1.65
CBX3-204ENST00000456948 TTC28Q96AY4 2481 aa25.34■■□□□ 1.65
CBX3-204ENST00000456948 B4GALT3O60512 393 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 MCL1Q07820 350 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 ALCAMQ13740 583 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 HSP90AA2PQ14568 343 aaPredicted RBP25.33■■□□□ 1.65
CBX3-204ENST00000456948 HERC4Q5GLZ8 1057 aaPredicted RBP25.33■■□□□ 1.65
CBX3-204ENST00000456948 AXDND1Q5T1B0 1012 aaPredicted RBP25.33■■□□□ 1.65
CBX3-204ENST00000456948 SLFN12LQ6IEE8 588 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 SHC4Q6S5L8 630 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 STXBP4Q6ZWJ1 553 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 CASP10Q92851 521 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 DHX58Q96C10 678 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 ADAM28Q9UKQ2 775 aa25.33■■□□□ 1.65
CBX3-204ENST00000456948 ATG2AQ2TAZ0 1938 aa25.32■■□□□ 1.64
CBX3-204ENST00000456948 GRXCR2A6NFK2 248 aa25.32■■□□□ 1.64
CBX3-204ENST00000456948 PTGESO14684 152 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms