RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 DOCK6Q96HP0 2047 aa20.73■□□□□ 0.91
COL20A1-204ENST00000455906 NARSO43776 548 aaKnown RBP20.72■□□□□ 0.91
COL20A1-204ENST00000455906 EDN1P05305 212 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 RPL17P18621 184 aaKnown RBP20.72■□□□□ 0.91
COL20A1-204ENST00000455906 HSP90AA2PQ14568 343 aaPredicted RBP20.72■□□□□ 0.91
COL20A1-204ENST00000455906 POTEGQ6S5H5 508 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 RSAD2Q8WXG1 361 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 RIN2Q8WYP3 895 aaPredicted RBP20.72■□□□□ 0.91
COL20A1-204ENST00000455906 MYADMQ96S97 322 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 NT5C3AQ9H0P0 336 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 CXCL16Q9H2A7 254 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 PPP4R2Q9NY27 417 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 EPS15L1Q9UBC2 864 aa20.72■□□□□ 0.91
COL20A1-204ENST00000455906 WDR87Q6ZQQ6 2873 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 FAM186AA6NE01 2351 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 PTGESO14684 152 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 PI15O43692 258 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 TADA2AO75478 443 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 SEC24BO95487 1268 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 RPA1P27694 616 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 GBP2P32456 591 aaPredicted RBP20.71■□□□□ 0.91
COL20A1-204ENST00000455906 TUSC3Q13454 348 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 NAB2Q15742 525 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 RTP2Q5QGT7 225 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 GLYCTKQ8IVS8 523 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 ZBTB8OSQ8IWT0 167 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 FLCNQ8NFG4 579 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 STAMQ92783 540 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 CCDC113Q9H0I3 377 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 ZDHHC7Q9NXF8 308 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 SNTG2Q9NY99 539 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 USP20Q9Y2K6 914 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 SPTBN4Q9H254 2564 aa20.71■□□□□ 0.91
COL20A1-204ENST00000455906 VWA8A3KMH1 1905 aa20.7■□□□□ 0.91
COL20A1-204ENST00000455906 N4BP3O15049 544 aa20.7■□□□□ 0.9
COL20A1-204ENST00000455906 OR52Z1P0C646 297 aa20.7■□□□□ 0.9
COL20A1-204ENST00000455906 CYP11B2P19099 503 aa20.7■□□□□ 0.9
COL20A1-204ENST00000455906 AOC1P19801 751 aa20.7■□□□□ 0.9
COL20A1-204ENST00000455906 NBL1P41271 181 aa20.7■□□□□ 0.9
COL20A1-204ENST00000455906 ORC2Q13416 577 aaPredicted RBP20.7■□□□□ 0.9
COL20A1-204ENST00000455906 SAFBQ15424 915 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL20A1-204ENST00000455906 PADI6Q6TGC4 694 aa20.7■□□□□ 0.9
COL20A1-204ENST00000455906 PRSS55Q6UWB4 352 aaPredicted RBP20.7■□□□□ 0.9
COL20A1-204ENST00000455906 C2orf40Q9H1Z8 148 aa20.7■□□□□ 0.9
COL20A1-204ENST00000455906 SF3B1O75533 1304 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL20A1-204ENST00000455906 TRIP11Q15643 1979 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 CASTOR2A6NHX0 329 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 ACKR2O00590 384 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 RECQL4O94761 1208 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 KIF4AO95239 1232 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 CREMQ03060 361 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 PRPF4BQ13523 1007 aaKnown RBP20.69■□□□□ 0.9
COL20A1-204ENST00000455906 ZNF174Q15697 407 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 EEF1DP3Q658K8 133 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 CCDC83Q8IWF9 413 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 SIX5Q8N196 739 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 HASPINQ8TF76 798 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 C8orf76Q96K31 380 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 PRKD2Q9BZL6 878 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 FBXL21Q9UKT6 434 aa20.69■□□□□ 0.9
COL20A1-204ENST00000455906 ARHGEF35A5YM69 484 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 ZMYND10O75800 440 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 PRKCBP05771 671 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 NAMPTP43490 491 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 ECM1Q16610 540 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 MAPK6Q16659 721 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 ASCL5Q7RTU5 278 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 NOSTRINQ8IVI9 506 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 SLC44A3Q8N4M1 653 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 ERMNQ8TAM6 284 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 LNX1Q8TBB1 728 aaPredicted RBP20.68■□□□□ 0.9
COL20A1-204ENST00000455906 PIK3R5Q8WYR1 880 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 CLSTN3Q9BQT9 956 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 FOXP1Q9H334 677 aaPredicted RBP20.68■□□□□ 0.9
COL20A1-204ENST00000455906 PIDD1Q9HB75 910 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 LIMCH1Q9UPQ0 1083 aa20.68■□□□□ 0.9
COL20A1-204ENST00000455906 KRBA1A5PL33 1030 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 THP07101 528 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 CFHP08603 1231 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 FAM171A1Q5VUB5 890 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 CCDC105Q8IYK2 499 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 C4orf32Q8N8J7 132 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 NXPE3Q969Y0 559 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 LLPHQ9BRT6 129 aaKnown RBP20.67■□□□□ 0.9
COL20A1-204ENST00000455906 TTPALQ9BTX7 342 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 KIFC3Q9BVG8 833 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 POLD4Q9HCU8 107 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 WNT16Q9UBV4 365 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 FBXW11Q9UKB1 542 aa20.67■□□□□ 0.9
COL20A1-204ENST00000455906 GVINP1Q7Z2Y8 2422 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 PRR23AA6NEV1 266 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 LAMP2P13473 410 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 MUTP22033 750 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 TTC38Q5R3I4 469 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 GET4Q7L5D6 327 aaPredicted RBP20.66■□□□□ 0.9
COL20A1-204ENST00000455906 FBXO18Q8NFZ0 1043 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 DEPTORQ8TB45 409 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 RTP3Q9BQQ7 232 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 ADPGKQ9BRR6 497 aa20.66■□□□□ 0.9
COL20A1-204ENST00000455906 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms