RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 TNRC6CQ9HCJ0 1690 aaKnown RBP14.66□□□□□ -0.06
PTPRE-204ENST00000455661 CDK5RAP2Q96SN8 1893 aa14.66□□□□□ -0.06
PTPRE-204ENST00000455661 IGKV6D-41A0A0C4DH26 115 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 FAM47DPA6NHR8 397 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 GAS8O95995 478 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ITGA8P53708 1063 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 INHBEP58166 350 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 KLC1Q07866 573 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 SNX1Q13596 522 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 STAT4Q14765 748 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ZC2HC1CQ53FD0 456 aaPredicted RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 RINT1Q6NUQ1 792 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 TPTE2Q6XPS3 522 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 CLEC10AQ8IUN9 316 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 MFN1Q8IWA4 741 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 CYP4X1Q8N118 509 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 KCTD17Q8N5Z5 321 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ENDOVQ8N8Q3 282 aaKnown RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 FAM13CQ8NE31 585 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ZNF564Q8TBZ8 553 aaPredicted RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 SH3TC2Q8TF17 1288 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 C1orf54Q8WWF1 131 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 POLR3CQ9BUI4 534 aaPredicted RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 PAPOLBQ9NRJ5 636 aaKnown RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 DNAJC17Q9NVM6 304 aaKnown RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 NINJ2Q9NZG7 142 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 UBE4BO95155 1302 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 RASA4BC9J798 803 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 RASA4O43374 803 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 NPTXRO95502 500 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 PDHA1P08559 390 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ATF2P15336 505 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ACADSP16219 412 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 FOXN2P32314 431 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ADCY1Q08828 1119 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 COG2Q14746 738 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 SLC15A2Q16348 729 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 SGSM1Q2NKQ1 1148 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ASAP3Q8TDY4 903 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 DNAJC9Q8WXX5 260 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 TRAIPQ9BWF2 469 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 IKZF4Q9H2S9 585 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 VCXQ9H320 206 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 BCAS3Q9H6U6 928 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 PARVGQ9HBI0 331 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 CHORDC1Q9UHD1 332 aaPredicted RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 ZMYND8Q9ULU4 1186 aaPredicted RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 PHTF1Q9UMS5 762 aa14.65□□□□□ -0.06
PTPRE-204ENST00000455661 RPL26L1Q9UNX3 145 aaKnown RBP14.65□□□□□ -0.06
PTPRE-204ENST00000455661 FSCN2O14926 492 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 CLDN3O15551 220 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 EXOC3O60645 756 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 GZMAP12544 262 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 CNGA1P29973 690 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 BFSP1Q12934 665 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 PTK6Q13882 451 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 GNPTABQ3T906 1256 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 ZNF746Q6NUN9 644 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-204ENST00000455661 APBB1IPQ7Z5R6 666 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-204ENST00000455661 CCDC24Q8N4L8 307 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 RNF217Q8TC41 542 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 EIF2AK1Q9BQI3 630 aaKnown RBP14.64□□□□□ -0.07
PTPRE-204ENST00000455661 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 AGPAT3Q9NRZ7 376 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 RGL2O15211 777 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 TP73O15350 636 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 MAGEB2O15479 319 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 GNAT1P11488 350 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 ADCY8P40145 1251 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 NR1H3Q13133 447 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 MUM1Q2TAK8 710 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 SEPT14Q6ZU15 432 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 RIBC1Q8N443 379 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-204ENST00000455661 CNBD1Q8NA66 436 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 TEKT4Q8WW24 435 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 FAM163AQ96GL9 167 aaPredicted RBP14.64□□□□□ -0.07
PTPRE-204ENST00000455661 TBC1D10AQ9BXI6 508 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 KIAA1683Q9H0B3 1180 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 DMAC2Q9NW81 257 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 SEL1LQ9UBV2 794 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 CHKBQ9Y259 395 aa14.64□□□□□ -0.07
PTPRE-204ENST00000455661 UBAP1LF5GYI3 381 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 ATMINO43313 823 aaPredicted RBP14.63□□□□□ -0.07
PTPRE-204ENST00000455661 TM4SF1P30408 202 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 PTDSS1P48651 473 aaKnown RBP14.63□□□□□ -0.07
PTPRE-204ENST00000455661 SPARCL1Q14515 664 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 TNIP1Q15025 636 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 CWF19L1Q69YN2 538 aaKnown RBP14.63□□□□□ -0.07
PTPRE-204ENST00000455661 TMEM154Q6P9G4 183 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
PTPRE-204ENST00000455661 BBOF1Q8ND07 529 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 DCLRE1BQ9H816 532 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 GSTTP1A0A1W2PQM5 241 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 SORBS3O60504 671 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 AP1G2O75843 785 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 ROR2Q01974 943 aaKnown RBP14.63□□□□□ -0.07
PTPRE-204ENST00000455661 GABPAQ06546 454 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 DNAJC3Q13217 504 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 PICALMQ13492 652 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms