RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 CHMP5Q9NZZ3 219 aa7.74□□□□□ -1.17
COMMD1-205ENST00000455659 KLK14Q9P0G3 267 aa7.74□□□□□ -1.17
COMMD1-205ENST00000455659 TBX20Q9UMR3 447 aa7.74□□□□□ -1.17
COMMD1-205ENST00000455659 HPSEQ9Y251 543 aa7.74□□□□□ -1.17
COMMD1-205ENST00000455659 PRG3Q9Y2Y8 225 aaPredicted RBP7.74□□□□□ -1.17
COMMD1-205ENST00000455659 MTCH2Q9Y6C9 303 aa7.74□□□□□ -1.17
COMMD1-205ENST00000455659 ABLIM1O14639 778 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 PIGRP01833 764 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 SLFN14P0C7P3 912 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 CXCL8P10145 99 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 MYBP10242 640 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 CASP1P29466 404 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 GRM5P41594 1212 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 AFMP43652 599 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 SLC11A1P49279 550 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 ALDH7A1P49419 539 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 AFF1P51825 1210 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 YARSP54577 528 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 BCAR1P56945 870 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 OSTNP61366 133 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 UBE3AQ05086 875 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 MCL1Q07820 350 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 SKIV2LQ15477 1246 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 ZC2HC1CQ53FD0 456 aaPredicted RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 HERC4Q5GLZ8 1057 aaPredicted RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 FAM26FQ5R3K3 315 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 L1TD1Q5T7N2 865 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 STXBP4Q6ZWJ1 553 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 UNC13DQ70J99 1090 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 TMEM173Q86WV6 379 aaPredicted RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 SLC39A11Q8N1S5 342 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 PPM1EQ8WY54 764 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 SNX27Q96L92 541 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 MSTO1Q9BUK6 570 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 FGFBP2Q9BYJ0 223 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 BLZF1Q9H2G9 400 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 ST6GALNAC4Q9H4F1 302 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 NSUN3Q9H649 340 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 NRDE2Q9H7Z3 1164 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 PTPRHQ9HD43 1115 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 ALG13Q9NP73 1137 aaKnown RBP7.73□□□□□ -1.17
COMMD1-205ENST00000455659 ENTPD7Q9NQZ7 604 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 TLR9Q9NR96 1032 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 EXOC1Q9NV70 894 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 KANSL3Q9P2N6 904 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 DNAJB4Q9UDY4 337 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 USP25Q9UHP3 1055 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 SERTAD1Q9UHV2 236 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 PLAGL2Q9UPG8 496 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 UBE4BO95155 1302 aa7.73□□□□□ -1.17
COMMD1-205ENST00000455659 PLXNA3P51805 1871 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 FAM237AA0A1B0GTK4 181 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CASTOR2A6NHX0 329 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 TISP43B9A030 160 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 NT5C1B-RDH14C9J2C7 533 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 PTGESO14684 152 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CLDN3O15551 220 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 PRR29P0C7W0 189 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CA8P35219 290 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 OR1G1P47890 313 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 GTF2BQ00403 316 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 PPP2R3AQ06190 1150 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 DSC1Q08554 894 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 TUSC3Q13454 348 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CUL4BQ13620 913 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CCDC85BQ15834 202 aaPredicted RBP7.72□□□□□ -1.17
COMMD1-205ENST00000455659 PLPP4Q5VZY2 271 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CNNM4Q6P4Q7 775 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 SLC39A4Q6P5W5 647 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 ZNF280BQ86YH2 543 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 SYCP3Q8IZU3 236 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 BCL7CQ8WUZ0 217 aaPredicted RBP7.72□□□□□ -1.17
COMMD1-205ENST00000455659 POF1BQ8WVV4 589 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 HPS3Q969F9 1004 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 PPP2R3CQ969Q6 453 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CCDC34Q96HJ3 373 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 ZBTB45Q96K62 511 aaPredicted RBP7.72□□□□□ -1.17
COMMD1-205ENST00000455659 ACCSQ96QU6 501 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 C7orf25Q9BPX7 421 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 TCF25Q9BQ70 676 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 TMEM175Q9BSA9 504 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 MARCH5Q9NX47 278 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 SPG21Q9NZD8 308 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 LMCD1Q9NZU5 365 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 THEGQ9P2T0 379 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 CACNG4Q9UBN1 327 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 EXOC7Q9UPT5 735 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 PCDHGC5Q9Y5F6 944 aa7.72□□□□□ -1.17
COMMD1-205ENST00000455659 SCN1AP35498 2009 aa7.71□□□□□ -1.17
COMMD1-205ENST00000455659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.71□□□□□ -1.18
COMMD1-205ENST00000455659 OGTO15294 1046 aa7.71□□□□□ -1.18
COMMD1-205ENST00000455659 EIF3DO15371 548 aaKnown RBP eCLIP7.71□□□□□ -1.18
COMMD1-205ENST00000455659 NR1I2O75469 434 aa7.71□□□□□ -1.18
COMMD1-205ENST00000455659 DDHD2O94830 711 aa7.71□□□□□ -1.18
COMMD1-205ENST00000455659 KIF4AO95239 1232 aa7.71□□□□□ -1.18
COMMD1-205ENST00000455659 MYL1P05976 194 aa7.71□□□□□ -1.18
COMMD1-205ENST00000455659 THP07101 528 aa7.71□□□□□ -1.18
COMMD1-205ENST00000455659 GALTP07902 379 aa7.71□□□□□ -1.18
COMMD1-205ENST00000455659 POU3F3P20264 500 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms