RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TCP11X2Q5H9J9 407 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 APTXQ7Z2E3 356 aaKnown RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 ZNF598Q86UK7 904 aaKnown RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 CDR2LQ86X02 465 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 CBWD2Q8IUF1 395 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 TRIM59Q8IWR1 403 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 CD302Q8IX05 232 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 FAM186BQ8IYM0 893 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 ZSWIM2Q8NEG5 633 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 RSPH1Q8WYR4 309 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 CNOT6LQ96LI5 555 aaKnown RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 ADAM2Q99965 735 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 EIF2AQ9BY44 585 aaKnown RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 PCIF1Q9H4Z3 704 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 ASB7Q9H672 318 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 PLEKHA5Q9HAU0 1116 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 IL23AQ9NPF7 189 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 LIMA1Q9UHB6 759 aaKnown RBP12.25□□□□□ -0.45
TRAF4-206ENST00000454852 IPPQ9Y573 584 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 PCDHB2Q9Y5E7 798 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 TET1Q8NFU7 2136 aa12.25□□□□□ -0.45
TRAF4-206ENST00000454852 ABHD14A-ACY1A0A1B0GW23 586 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 TTC26A0AVF1 554 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 KCNJ18B7U540 433 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 ENPP3O14638 875 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 PMM2O15305 246 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 BAIAP3O94812 1187 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 STAG3L1P0CL83 205 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 CSF2RAP15509 400 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 CYP24A1Q07973 514 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 PPIGQ13427 754 aaKnown RBP eCLIP12.24□□□□□ -0.452e-10■■□□□ 14.3
TRAF4-206ENST00000454852 KCNJ12Q14500 433 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 PSMD6Q15008 389 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 CEP135Q66GS9 1140 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 SARM1Q6SZW1 724 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 ALKAL1Q6UXT8 129 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 ZBTB33Q86T24 672 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 USP37Q86T82 979 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 NT5DC4Q86YG4 428 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 HACE1Q8IYU2 909 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 C7orf61Q8IZ16 206 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 CEP120Q8N960 986 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 RNF214Q8ND24 703 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 PARD3BQ8TEW8 1205 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 SAAL1Q96ER3 474 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 ACAP3Q96P50 834 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-206ENST00000454852 TRIM6Q9C030 488 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-206ENST00000454852 UBN1Q9NPG3 1134 aa12.24□□□□□ -0.45
TRAF4-206ENST00000454852 ARMCX3Q9UH62 379 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-206ENST00000454852 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-206ENST00000454852 MICAL3Q7RTP6 2002 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 ANK1P16157 1881 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 GOLGA8IPA6NC78 632 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 GOLGA8JA6NMD2 632 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 MEFVO15553 781 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 IL18RAPO95256 599 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 ATF7P17544 494 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 GTF2H1P32780 548 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 TNFSF9P41273 254 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 MATR3P43243 847 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 ACOT2P49753 483 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 RGS19P49795 217 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 AP3M2P53677 418 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 FPGSQ05932 587 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 BFSP1Q12934 665 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 IKBKEQ14164 716 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 ENOX2Q16206 610 aaKnown RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 MAN2A1Q16706 1144 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 TCTN1Q2MV58 587 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 SLC10A6Q3KNW5 377 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 ZBTB41Q5SVQ8 909 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 ECHDC2Q86YB7 292 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 THNSL1Q8IYQ7 743 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 ANKRD20A12PQ8NF67 263 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 SLC35C1Q96A29 364 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 NXF3Q9H4D5 531 aaKnown RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 TOPORSQ9NS56 1045 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 TMEM161AQ9NX61 479 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 RBAKQ9NYW8 714 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 CNTN3Q9P232 1028 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 MAGEC2Q9UBF1 373 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-206ENST00000454852 GIT1Q9Y2X7 761 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 DERAQ9Y315 318 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 NR2E3Q9Y5X4 410 aa12.23□□□□□ -0.45
TRAF4-206ENST00000454852 MKI67P46013 3256 aaKnown RBP12.22□□□□□ -0.45
TRAF4-206ENST00000454852 TTC3P53804 2025 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 ATP1A3P13637 1013 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 KRT13P13646 458 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 KCNE1P15382 129 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 VAMP7P51809 220 aa12.22□□□□□ -0.45
TRAF4-206ENST00000454852 YARSP54577 528 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms