RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 LRRC1Q9BTT6 524 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PI4K2AQ9BTU6 479 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 LCMT1Q9UIC8 334 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 MED1Q15648 1581 aaPredicted RBP10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 A0A087X0T9 212 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GMNNO75496 209 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CSPG5O95196 566 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FAM228BP0C875 321 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KRT3P12035 628 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RBP5P82980 135 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ADCY2Q08462 1091 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TMEM62Q0P6H9 643 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 IFT88Q13099 833 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ATF7IP2Q5U623 682 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TRIM65Q6PJ69 517 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NYAP1Q6ZVC0 841 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 THEM5Q8N1Q8 247 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 C1orf54Q8WWF1 131 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CPA5Q8WXQ8 436 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 MS4A14Q96JA4 679 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CBWD1Q9BRT8 395 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PRMT7Q9NVM4 692 aaPredicted RBP10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CAPN7Q9Y6W3 813 aa10.69□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KNDC1Q76NI1 1749 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CACNA1FO60840 1977 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 HOXD10P28358 340 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ADORA2BP29275 332 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 LIG3P49916 1009 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 BCAR1P56945 870 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ERVK-24P63145 666 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TSPY1Q01534 308 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RWDD4Q6NW29 188 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CBWD2Q8IUF1 395 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TEX2Q8IWB9 1127 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CCDC197Q8NCU1 140 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FAF2Q96CS3 445 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PNMA5Q96PV4 448 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KLC2Q9H0B6 622 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CNOT10Q9H9A5 744 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ZCCHC17Q9NP64 241 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PGK2P07205 417 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ELF1P32519 619 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PMS1P54277 932 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CDC42EP1Q00587 391 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 LAMC2Q13753 1193 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PCNX4Q63HM2 1172 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RAPH1Q70E73 1250 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 REXO1L1PQ8IX06 675 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KIAA0895Q8NCT3 520 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SMYD2Q9NRG4 433 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 STK38LQ9Y2H1 464 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PCDHAC2Q9Y5I4 1007 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 EXTL3O43909 919 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 AKAP3O75969 853 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CELF2O95319 508 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NPTX2P47972 431 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ARL4CP56559 192 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TMEM132DQ14C87 1099 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FIGNQ5HY92 759 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ZNF720Q7Z2F6 126 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PCGF5Q86SE9 256 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 COG1Q8WTW3 980 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GOLPH3Q9H4A6 298 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PFDN4Q9NQP4 134 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PXMP2Q9NR77 195 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 IPO11Q9UI26 975 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NAGPAQ9UK23 515 aa10.68□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PFDN6O15212 129 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CTSHP09668 335 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CYP2C9P11712 490 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GGCXP38435 758 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 EPC2Q52LR7 807 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 MMS22LQ6ZRQ5 1243 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 MKL1Q969V6 931 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TNIP3Q96KP6 325 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CALRP27797 417 aaKnown RBP10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CDH6P55285 790 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RPS6KA2Q15349 733 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NT5DC1Q5TFE4 455 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 C4orf50Q6ZRC1 276 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PI4K2BG5E9Z4 385 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 WEE2P0C1S8 567 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SUPT20HL2P0C7V6 817 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PON1P27169 355 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 EPHX2P34913 555 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NLRP11P59045 1033 aaKnown RBP10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PDCLQ13371 301 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 C4orf19Q8IY42 314 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DNAJC7Q99615 494 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DHX35Q9H5Z1 703 aaKnown RBP10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 OLFML3Q9NRN5 406 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 BLOC1S4Q9NUP1 217 aa10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KLHL8Q9P2G9 620 aaPredicted RBP10.67□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GOLGA8MH3BSY2 632 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FOXN3O00409 490 aaPredicted RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 VWA5AO00534 786 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GAS2O43903 313 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms