RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PDZD7Q9H5P4 517 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 C11orf16Q9NQ32 467 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 PRMT7Q9NVM4 692 aaPredicted RBP17.17■□□□□ 0.34
VCX3B-204ENST00000453306 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 PPP1R3GB7ZBB8 358 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 DCXO43602 365 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 SMC2O95347 1197 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 PIGRP01833 764 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 PROZP22891 400 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 SFPQP23246 707 aaKnown RBP eCLIP17.16■□□□□ 0.34
VCX3B-204ENST00000453306 ADSSP30520 456 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 FAM189BP81408 668 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 PSMD2Q13200 908 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
VCX3B-204ENST00000453306 BMT2Q1RMZ1 405 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 CTC1Q2NKJ3 1217 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
VCX3B-204ENST00000453306 CAVIN1Q6NZI2 390 aaKnown RBP17.16■□□□□ 0.34
VCX3B-204ENST00000453306 NELFCDQ8IXH7 590 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 ZSWIM2Q8NEG5 633 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 LRFN2Q9ULH4 789 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 PIN4Q9Y237 131 aaKnown RBP17.16■□□□□ 0.34
VCX3B-204ENST00000453306 CNTNAP2Q9UHC6 1331 aa17.16■□□□□ 0.34
VCX3B-204ENST00000453306 C9IYK1 514 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
VCX3B-204ENST00000453306 ATF7P17544 494 aaPredicted RBP17.15■□□□□ 0.34
VCX3B-204ENST00000453306 PRCPP42785 496 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 ZP2Q05996 745 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 HYAL1Q12794 435 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 ZNF658Q5TYW1 1059 aaPredicted RBP17.15■□□□□ 0.34
VCX3B-204ENST00000453306 MED15Q96RN5 788 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 KCTD10Q9H3F6 313 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 RGS18Q9NS28 235 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 KCNG1Q9UIX4 513 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 HOOK1Q9UJC3 728 aaKnown RBP17.15■□□□□ 0.34
VCX3B-204ENST00000453306 PLAGL2Q9UPG8 496 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 TNFSF13BQ9Y275 285 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 PCDHB13Q9Y5F0 798 aa17.15■□□□□ 0.34
VCX3B-204ENST00000453306 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 EIF3DO15371 548 aaKnown RBP eCLIP17.14■□□□□ 0.33
VCX3B-204ENST00000453306 ERLIN2O94905 339 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 CCDC183Q5T5S1 534 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 ATF7IP2Q5U623 682 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 ZPBP2Q6X784 338 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 SMG8Q8ND04 991 aaKnown RBP17.14■□□□□ 0.33
VCX3B-204ENST00000453306 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 PRIMPOLQ96LW4 560 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 ACCSQ96QU6 501 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
VCX3B-204ENST00000453306 CXCL16Q9H2A7 254 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 IGFLR1Q9H665 355 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 ALG13Q9NP73 1137 aaKnown RBP17.14■□□□□ 0.33
VCX3B-204ENST00000453306 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 RNF19AQ9NV58 838 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 MRPL42Q9Y6G3 142 aaKnown RBP17.14■□□□□ 0.33
VCX3B-204ENST00000453306 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 PIEZO1Q92508 2521 aa17.14■□□□□ 0.33
VCX3B-204ENST00000453306 LOXHD1Q8IVV2 1947 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 H0YCG3 227 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 FAM189A1O60320 539 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 LTBRP36941 435 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 PMS1P54277 932 aaKnown RBP17.13■□□□□ 0.33
VCX3B-204ENST00000453306 STRN3Q13033 797 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
VCX3B-204ENST00000453306 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.33
VCX3B-204ENST00000453306 SMAD2Q15796 467 aaKnown RBP17.13■□□□□ 0.33
VCX3B-204ENST00000453306 ZBTB41Q5SVQ8 909 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 ZNF598Q86UK7 904 aaKnown RBP17.13■□□□□ 0.33
VCX3B-204ENST00000453306 ADSSL1Q8N142 457 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 CEP120Q8N960 986 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 HVCN1Q96D96 273 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 CDT1Q9H211 546 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 CD207Q9UJ71 328 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 HES2Q9Y543 173 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 PCDHB7Q9Y5E2 793 aa17.13■□□□□ 0.33
VCX3B-204ENST00000453306 BRWD1Q9NSI6 2320 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 A0A0B4J269 797 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 MBTPS2O43462 519 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 NPTXRO95502 500 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 AXLP30530 894 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 NDUFV1P49821 464 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 ALCAMQ13740 583 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 KNOP1Q1ED39 458 aaKnown RBP17.12■□□□□ 0.33
VCX3B-204ENST00000453306 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
VCX3B-204ENST00000453306 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 SEZ6Q53EL9 994 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 MRPL10Q7Z7H8 261 aaKnown RBP17.12■□□□□ 0.33
VCX3B-204ENST00000453306 ZBTB33Q86T24 672 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 GUF1Q8N442 669 aaKnown RBP17.12■□□□□ 0.33
VCX3B-204ENST00000453306 CBWD1Q9BRT8 395 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 AAASQ9NRG9 546 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 C1orf112Q9NSG2 853 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms