RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 FNDC8Q8TC99 324 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 SMC6Q96SB8 1091 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 TCP11L1Q9NUJ3 509 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 ADAMTS1Q9UHI8 967 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 SIPA1L1O43166 1804 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 RGPD3A6NKT7 1758 aaPredicted RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 ATRXP46100 2492 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 SLC37A4O43826 429 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 ENPP1P22413 925 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 EPHB2P29323 1055 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 RNASE9P60153 205 aaKnown RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 MAP3K10Q02779 954 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 TCERG1LQ5VWI1 586 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 THOC7Q6I9Y2 204 aaKnown RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 PABPC3Q9H361 631 aaKnown RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 KANSL3Q9P2N6 904 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 CNOT7Q9UIV1 285 aaKnown RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 RTCBQ9Y3I0 505 aaKnown RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 CNTRLQ7Z7A1 2325 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 OR52Z1P0C646 297 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 CALML3P27482 149 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 CCT8P50990 548 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 EPM2AIP1Q7L775 607 aaPredicted RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 LNX1Q8TBB1 728 aaPredicted RBP11.68□□□□□ -0.54
CHL1-208ENST00000453040 LRRC45Q96CN5 670 aa11.68□□□□□ -0.54
CHL1-208ENST00000453040 CCDC188H7C350 402 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 DDX3XO00571 662 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHL1-208ENST00000453040 P4HA2O15460 535 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 B4GALT4O60513 344 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 ZCCHC18P0CG32 403 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 CYP7A1P22680 504 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 RELAQ04206 551 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 MSLNQ13421 630 aaPredicted RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 SPATA24Q86W54 205 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 MYLK2Q9H1R3 596 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 MMRN2Q9H8L6 949 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 FAM114A2Q9NRY5 505 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 FGFR1OP2Q9NVK5 253 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 USP15Q9Y4E8 981 aaPredicted RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 WASF2Q9Y6W5 498 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 USP17L12C9JPN9 530 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 USP17L21D6R901 530 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 E9PBE3 544 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 AUHQ13825 339 aaKnown RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 TTC27Q6P3X3 843 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 VASH1Q7L8A9 365 aaPredicted RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 BPHLQ86WA6 291 aaPredicted RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 ARHGAP18Q8N392 663 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 CPSF7Q8N684 471 aaKnown RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 RAD54LQ92698 747 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 HAS1Q92839 578 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 KIAA1683Q9H0B3 1180 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 SLC5A2P31639 672 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 MOGSQ13724 837 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 TCEAL1Q15170 157 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 SLC9C1Q4G0N8 1177 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 SNX30Q5VWJ9 437 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 C4orf50Q6ZRC1 276 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 RAVER1Q8IY67 606 aaKnown RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 ZBED8Q8IZ13 594 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 TTC16Q8NEE8 873 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 SCFD1Q8WVM8 642 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 PRICKLE1Q96MT3 831 aaPredicted RBP11.67□□□□□ -0.54
CHL1-208ENST00000453040 MKNK2Q9HBH9 465 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 TTLL3Q9Y4R7 772 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 TLL2Q9Y6L7 1015 aa11.67□□□□□ -0.54
CHL1-208ENST00000453040 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 KCNK3O14649 394 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 NTSR2O95665 410 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 TFAP2AP05549 437 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
CHL1-208ENST00000453040 TNNC1P63316 161 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 CCDC142Q17RM4 750 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 ANKDD1AQ495B1 522 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 NANOGNBQ7Z5D8 188 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 SLC43A3Q8NBI5 491 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 UHMK1Q8TAS1 419 aaKnown RBP11.66□□□□□ -0.54
CHL1-208ENST00000453040 NR1H4Q96RI1 486 aaPredicted RBP11.66□□□□□ -0.54
CHL1-208ENST00000453040 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
CHL1-208ENST00000453040 KANSL2Q9H9L4 492 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 NLRC4Q9NPP4 1024 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 PPP1R9AQ9ULJ8 1098 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 CD2APQ9Y5K6 639 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 ZNF646O15015 1829 aaPredicted RBP11.66□□□□□ -0.54
CHL1-208ENST00000453040 SPATA31A5Q5VU36 1347 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 SPATA31A6Q5VVP1 1343 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 SPATA31A7Q8IWB4 1347 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 QSER1Q2KHR3 1735 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 ANKRD63C9JTQ0 380 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
CHL1-208ENST00000453040 PGRMC1O00264 195 aaKnown RBP11.66□□□□□ -0.54
CHL1-208ENST00000453040 NVLO15381 856 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms