RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ZIM3Q96PE6 472 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 TSPAN18Q96SJ8 248 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 SENP7Q9BQF6 1050 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 SUDS3Q9H7L9 328 aaPredicted RBP12.99□□□□□ -0.33
COL27A1-202ENST00000451716 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 AFG3L2Q9Y4W6 797 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 WDR81Q562E7 1941 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 GOLGA6CA6NDK9 693 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 GOLGA6DP0CG33 693 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 ATP4AP20648 1035 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 RFX1P22670 979 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 TNFRSF8P28908 595 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 MARCKSL1P49006 195 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 ARMC3Q5W041 872 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 FAM71AQ8IYT1 594 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 ANKRD35Q8N283 1001 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 R3HDMLQ9H3Y0 253 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 GOLGA6AQ9NYA3 693 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 PSD3Q9NYI0 1048 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 CPSF2Q9P2I0 782 aaKnown RBP12.99□□□□□ -0.33
COL27A1-202ENST00000451716 NOCTQ9UK39 431 aaKnown RBP12.99□□□□□ -0.33
COL27A1-202ENST00000451716 SSC5DA1L4H1 1573 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 SPATA31C2B4DYI2 1134 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 TTI1O43156 1089 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 HSF2BPO75031 334 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 DGAT1O75907 488 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 MNAT1P51948 309 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 OAZ1P54368 228 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 WNT7BP56706 349 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 KCTD16Q68DU8 428 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 EEPD1Q7L9B9 569 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 TRIM74Q86UV6 250 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 TRIM73Q86UV7 250 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 HELQQ8TDG4 1101 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 TMEM174Q8WUU8 243 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 KRT35Q92764 455 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
COL27A1-202ENST00000451716 TRIM31Q9BZY9 425 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 NEUROG2Q9H2A3 272 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 ALG6Q9Y672 507 aa12.99□□□□□ -0.33
COL27A1-202ENST00000451716 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 VGLL4Q14135 290 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 MESDQ14696 234 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 LLGL1Q15334 1064 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 GNPTABQ3T906 1256 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 FOXR1Q6PIV2 292 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 RASGEF1CQ8N431 466 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
COL27A1-202ENST00000451716 RUFY1Q96T51 708 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 ATP6V0A4Q9HBG4 840 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 RAB20Q9NX57 234 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 USP2O75604 605 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-202ENST00000451716 FAM163BP0C2L3 166 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 ACOT2P49753 483 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 POLGP54098 1239 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-202ENST00000451716 PPARDQ03181 441 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 ADCY2Q08462 1091 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 TTMPQ5BVD1 217 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 PHLDB2Q86SQ0 1253 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 SH2D3CQ8N5H7 860 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 FBXL13Q8NEE6 735 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 ZBTB45Q96K62 511 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-202ENST00000451716 ISCUQ9H1K1 167 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
COL27A1-202ENST00000451716 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 MAPK13O15264 365 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 DAPK3O43293 454 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 KRT5P13647 590 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 ECHS1P30084 290 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 MFAP3P55082 362 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 FMO1Q01740 532 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 EMC2Q15006 297 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 SUPT20HL1Q3ZLR7 823 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 MIS18BP1Q6P0N0 1132 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 MCPH1Q8NEM0 835 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL27A1-202ENST00000451716 SHC3Q92529 594 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 IFT74Q96LB3 600 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 DPH5Q9H2P9 285 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
COL27A1-202ENST00000451716 RABEP2Q9H5N1 569 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 ERVK-5Q9HDB9 667 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 BTBD7Q9P203 1132 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 ATP8B3O60423 1300 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 CYP11B1P15538 503 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 ABCD1P33897 745 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 ACTN2P35609 894 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 FLT3P36888 993 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 SNRPFP62306 86 aaKnown RBP12.97□□□□□ -0.33
COL27A1-202ENST00000451716 GPC5P78333 572 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 SEZ6Q53EL9 994 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 CFAP58Q5T655 872 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 FMNL3Q8IVF7 1028 aa12.97□□□□□ -0.33
COL27A1-202ENST00000451716 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms