RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PRPF4BQ13523 1007 aaKnown RBP18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 BMS1Q14692 1282 aaKnown RBP18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 MAPK6Q16659 721 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 HYIQ5T013 277 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 SYCE2Q6PIF2 218 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 TMEM184AQ6ZMB5 413 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 USP49Q70CQ1 688 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 COLGALT2Q8IYK4 626 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 HACE1Q8IYU2 909 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 IQUBQ8NA54 791 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 IFT74Q96LB3 600 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 PRIMPOLQ96LW4 560 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 C1QTNF1Q9BXJ1 281 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 PDZD7Q9H5P4 517 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 GIT1Q9Y2X7 761 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 HCFC2Q9Y5Z7 792 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 C5orf42Q9H799 3197 aa18.74■□□□□ 0.59
PRPF40A-204ENST00000450303 FSD2A1L4K1 749 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 CARNS1A5YM72 827 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 F8W810 466 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 SRGAP2BP0DMP2 458 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 COL9A1P20849 921 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 STAT6P42226 847 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 FAM160A1Q05DH4 1040 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 KARSQ15046 597 aaKnown RBP18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 PPP2R5AQ15172 486 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 FAM187BQ17R55 369 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 EEF1DP3Q658K8 133 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 TAS1R1Q7RTX1 841 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 RABGGTAQ92696 567 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 KIFAP3Q92845 792 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 PNMA5Q96PV4 448 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 RUSC1Q9BVN2 902 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 CCDC113Q9H0I3 377 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 S1PR5Q9H228 398 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 CDH22Q9UJ99 828 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 HPSEQ9Y251 543 aa18.73■□□□□ 0.59
PRPF40A-204ENST00000450303 CCDC169A6NNP5 214 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 ACKR2O00590 384 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 N4BP3O15049 544 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 INPPL1O15357 1258 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 POLR2DO15514 142 aaKnown RBP18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 HIP1RO75146 1068 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 NDUFA8P51970 172 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 PEX3P56589 373 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 RINT1Q6NUQ1 792 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 KANK3Q6NY19 840 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 CEP57L1Q8IYX8 460 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 PDILTQ8N807 584 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 GSTCDQ8NEC7 633 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 CASP10Q92851 521 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 PANK2Q9BZ23 570 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 CXCL16Q9H2A7 254 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 CUEDC2Q9H467 287 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 MARCH5Q9NX47 278 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 SNTG2Q9NY99 539 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 CACNG4Q9UBN1 327 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 STK17AQ9UEE5 414 aa18.72■□□□□ 0.59
PRPF40A-204ENST00000450303 SFI1A8K8P3 1242 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 C2CD2LO14523 706 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 KINO60870 393 aaKnown RBP18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 EPCAMP16422 314 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 DSC1Q08554 894 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 RAD51AP2Q09MP3 1159 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 PTPN14Q15678 1187 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 NT5DC1Q5TFE4 455 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 DAW1Q8N136 415 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 C12orf76Q8N812 135 aaPredicted RBP18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 DHX58Q96C10 678 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 RPGRIP1Q96KN7 1286 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 POP1Q99575 1024 aaKnown RBP18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 LRFN3Q9BTN0 628 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 GOLPH3LQ9H4A5 285 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 C11orf16Q9NQ32 467 aa18.71■□□□□ 0.59
PRPF40A-204ENST00000450303 MYH11P35749 1972 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 GOLGA6L3A6NEY3 463 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 K7ERI5 159 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 ZNF202O95125 648 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 PLCG1P19174 1290 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 TMEM119Q4V9L6 283 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 TMEM31Q5JXX7 168 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 C1orf186Q6ZWK4 172 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 RNF135Q8IUD6 432 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 SUSD6Q92537 303 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 RPS6KC1Q96S38 1066 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 PHF7Q9BWX1 381 aaPredicted RBP18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 LRRC27Q9C0I9 530 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 MAGEF1Q9HAY2 307 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 HOOK1Q9UJC3 728 aaKnown RBP18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 IRAK3Q9Y616 596 aa18.7■□□□□ 0.58
PRPF40A-204ENST00000450303 DCXO43602 365 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 WEE2P0C1S8 567 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 ALADP13716 330 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 SP100P23497 879 aaPredicted RBP18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 KLRC2P26717 231 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 NPTX2P47972 431 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 EFNA5P52803 228 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 AMPD3Q01432 767 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 MAPK7Q13164 816 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 GIT2Q14161 759 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms