RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 KAT6AQ92794 2004 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 RBAK-RBAKDNI3L0D1 243 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 ZNF263O14978 683 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 SEPT4O43236 478 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 B4GALT5O43286 388 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 HARSP12081 509 aaKnown RBP15.44■□□□□ 0.06
USP39-207ENST00000450066 FERP16591 822 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 PURAQ00577 322 aaKnown RBP15.44■□□□□ 0.06
USP39-207ENST00000450066 CAP1Q01518 475 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 DRAP1Q14919 205 aaPredicted RBP15.44■□□□□ 0.06
USP39-207ENST00000450066 ZBTB33Q86T24 672 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 GPIHBP1Q8IV16 184 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 NLRP7Q8WX94 980 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 PDE11AQ9HCR9 933 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 RAB20Q9NX57 234 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 RNF186Q9NXI6 227 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 CNTNAP2Q9UHC6 1331 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 SMIM35A0A1B0GVV1 85 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 TULP1O00294 542 aaPredicted RBP15.43■□□□□ 0.06
USP39-207ENST00000450066 TRPA1O75762 1119 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 TNNI1P19237 187 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 ANXA13P27216 316 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 SOX5P35711 763 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 GNG11P61952 73 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 ADAM17P78536 824 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 CYP27A1Q02318 531 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 AMHR2Q16671 573 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 KIAA1328Q86T90 577 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 BRSK2Q8IWQ3 736 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 ZNF784Q8NCA9 323 aaPredicted RBP15.43■□□□□ 0.06
USP39-207ENST00000450066 TAS1R2Q8TE23 839 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 ZNF516Q92618 1163 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 SEMA4DQ92854 862 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 GPR88Q9GZN0 384 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 UPF3AQ9H1J1 476 aaKnown RBP15.43■□□□□ 0.06
USP39-207ENST00000450066 UBE2TQ9NPD8 197 aaPredicted RBP15.43■□□□□ 0.06
USP39-207ENST00000450066 DNAI1Q9UI46 699 aa15.43■□□□□ 0.06
USP39-207ENST00000450066 KIF5CO60282 957 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 LRRN2O75325 713 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 C6orf222P0C671 652 aaPredicted RBP15.42■□□□□ 0.06
USP39-207ENST00000450066 VAV2P52735 878 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 WNT7BP56706 349 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 NKX3-2P78367 333 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 PTK2Q05397 1052 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 CACNB2Q08289 660 aaPredicted RBP15.42■□□□□ 0.06
USP39-207ENST00000450066 TMEM132AQ24JP5 1023 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 ZNF568Q3ZCX4 644 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 ZACNQ401N2 412 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 SRGAP1Q7Z6B7 1085 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 PPP1R16BQ96T49 567 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 CGRRF1Q99675 332 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 IFIH1Q9BYX4 1025 aaKnown RBP15.42■□□□□ 0.06
USP39-207ENST00000450066 MYO1AQ9UBC5 1043 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 CPSF3Q9UKF6 684 aaKnown RBP15.42■□□□□ 0.06
USP39-207ENST00000450066 PCDHA13Q9Y5I0 950 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 ZC3H11AO75152 810 aaKnown RBP eCLIP15.42■□□□□ 0.06
USP39-207ENST00000450066 C4BPAP04003 597 aaKnown RBP15.42■□□□□ 0.06
USP39-207ENST00000450066 CCDC172P0C7W6 258 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 HOXD10P28358 340 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 TERF1P54274 439 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 GFPT1Q06210 699 aaPredicted RBP15.42■□□□□ 0.06
USP39-207ENST00000450066 SLC18A3Q16572 532 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 SEZ6Q53EL9 994 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 GNASQ5JWF2 1037 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 ARHGEF19Q8IW93 802 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 SCLT1Q96NL6 688 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 ADAMTS10Q9H324 1103 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 SPC25Q9HBM1 224 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 SRRDQ9UH36 339 aa15.42■□□□□ 0.06
USP39-207ENST00000450066 MYADML2A6NDP7 307 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 KRT86O43790 486 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 CSDE1O75534 798 aaKnown RBP15.41■□□□□ 0.06
USP39-207ENST00000450066 GFPT2O94808 682 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 ABL1P00519 1130 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 RARBP10826 455 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 GNAT1P11488 350 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 CYP2C9P11712 490 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 HOXC8P31273 242 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 TNFSF9P41273 254 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 AP3M2P53677 418 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 TRIM32Q13049 653 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 SURF1Q15526 300 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 EEF1DP3Q658K8 133 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 ZNF571Q7Z3V5 609 aaPredicted RBP15.41■□□□□ 0.06
USP39-207ENST00000450066 TXLNBQ8N3L3 684 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 JAKMIP2Q96AA8 810 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 IRX2Q9BZI1 471 aaPredicted RBP15.41■□□□□ 0.06
USP39-207ENST00000450066 CDT1Q9H211 546 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 PTPRJQ12913 1337 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 HTTP42858 3142 aa15.41■□□□□ 0.06
USP39-207ENST00000450066 EVI5O60447 810 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 VEGFBP49765 207 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 MFAP3P55082 362 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 HIC1Q14526 733 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 ENOX2Q16206 610 aaKnown RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 ARHGAP44Q17R89 818 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 CCDC122Q5T0U0 273 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 C7orf31Q8N865 590 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 NT5C1BQ96P26 610 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms