RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 HEY2Q9UBP5 337 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 SLC12A6Q9UHW9 1150 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 B2RBV5 119 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 NCALDP61601 193 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 XRCC4Q13426 336 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 ITIH4Q14624 930 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 RABGAP1LQ5R372 815 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 CPNE8Q86YQ8 564 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 MYLK2Q9H1R3 596 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 C12orf65Q9H3J6 166 aaKnown RBP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
UBE3B-204ENST00000449510 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
UBE3B-204ENST00000449510 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 FECHP22830 423 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 PHBP35232 272 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 MAGEA4P43358 317 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 TMEM270Q6UE05 265 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 IRF2BP2Q7Z5L9 587 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 RHPN2Q8IUC4 686 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 SLC4A9Q96Q91 983 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CD209Q9NNX6 404 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 NEU2Q9Y3R4 380 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CLRN2A0PK11 232 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 DNAJC8O75937 253 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 MARK3P27448 753 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 OLFML2BQ68BL8 750 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 RINT1Q6NUQ1 792 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 MREGQ8N565 214 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 RMDN2Q96LZ7 410 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 NACC1Q96RE7 527 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 DIP2AQ14689 1571 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 ASAP2O43150 1006 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 GJB6O95452 261 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 MTMR2Q13614 643 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 GIT2Q14161 759 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 EDRF1Q3B7T1 1238 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CBWD6Q4V339 395 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CBWD3Q5JTY5 395 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CBWD5Q5RIA9 395 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 CENPUQ71F23 418 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 SLC35C1Q96A29 364 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 ZSWIM1Q9BR11 485 aa13.18□□□□□ -0.3
UBE3B-204ENST00000449510 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 SCAF8Q9UPN6 1271 aaKnown RBP13.18□□□□□ -0.3
UBE3B-204ENST00000449510 ITSN1Q15811 1721 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-204ENST00000449510 HNRNPH3P31942 346 aaKnown RBP13.17□□□□□ -0.3
UBE3B-204ENST00000449510 NLRP9Q7RTR0 991 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 SLC47A2Q86VL8 602 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 XXYLT1Q8NBI6 393 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 NXF1Q9UBU9 619 aaKnown RBP13.17□□□□□ -0.3
UBE3B-204ENST00000449510 FIS1Q9Y3D6 152 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 LRRIQ4A6NIV6 560 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 ZSCAN5DPP0CG00 497 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 ETS2P15036 469 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 ATP6V1B1P15313 513 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 GAP43P17677 238 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 CHKAP35790 457 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 LIG4P49917 911 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 TRPC3Q13507 836 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 CDO1Q16878 200 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 RNF220Q5VTB9 566 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 LLGL2Q6P1M3 1020 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 RASSF3Q86WH2 238 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 OGFOD1Q8N543 542 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 PRELID2Q8N945 189 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 VCX3AQ9NNX9 186 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 FLT1P17948 1338 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 PIK3R2O00459 728 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 TLR3O15455 904 aaKnown RBP13.17□□□□□ -0.3
UBE3B-204ENST00000449510 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
UBE3B-204ENST00000449510 NTSR2O95665 410 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 PPATQ06203 517 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 ITPK1Q13572 414 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 SMTNL2Q2TAL5 461 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 MIGA2Q7L4E1 593 aa13.17□□□□□ -0.3
UBE3B-204ENST00000449510 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms