RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 EDEM3Q9BZQ6 932 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SLC38A10Q9HBR0 1119 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 GGT7Q9UJ14 662 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 RIPK3Q9Y572 518 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 PJA2O43164 708 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 TAF12Q16514 161 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 NAIF1Q69YI7 327 aaPredicted RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 TRIM68Q6AZZ1 485 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SCYL2Q6P3W7 929 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 TAOK1Q7L7X3 1001 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SYT2Q8N9I0 419 aaPredicted RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 HAS1Q92839 578 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 FAM167AQ96KS9 214 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 INPP5FQ9Y2H2 1132 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 A0A087X0T9 212 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 DGAT1O75907 488 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SLC25A27O95847 323 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 FAM228BP0C875 321 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SLC9A1P19634 815 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 NSFP46459 744 aaKnown RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 CASP4P49662 377 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 TREML2Q5T2D2 321 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 TWF2Q6IBS0 349 aaKnown RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 ANKRD42Q8N9B4 389 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SCFD2Q8WU76 684 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 PAIP2Q9BPZ3 127 aaKnown RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 TARS2Q9BW92 718 aaKnown RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 RPF1Q9H9Y2 349 aaKnown RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SIK3Q9Y2K2 1263 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 CICQ96RK0 1608 aaPredicted RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 FGGP02679 453 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 CHN1P15882 459 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 FERP16591 822 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SLC8A3P57103 927 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 EMC2Q15006 297 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 GJC2Q5T442 439 aaPredicted RBP12.06□□□□□ -0.48
PTCH2-203ENST00000447098 ANKRD36BP1Q96IX9 119 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 CEP63Q96MT8 703 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 OSBPL7Q9BZF2 842 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 SEL1LQ9UBV2 794 aa12.06□□□□□ -0.48
PTCH2-203ENST00000447098 DNM1LO00429 736 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 MEI1Q5TIA1 1274 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 KIAA0895Q8NCT3 520 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 RNF34Q969K3 372 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 CELF4Q9BZC1 486 aaKnown RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 SUCLA2Q9P2R7 463 aaPredicted RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 PFASO15067 1338 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 PCK1P35558 622 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 CLCN3P51790 818 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 SLC35G1Q2M3R5 365 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 AP1ARQ63HQ0 302 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 ZNF572Q7Z3I7 529 aaPredicted RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 CCHCR1Q8TD31 782 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 ELMO3Q96BJ8 720 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 BLOC1S4Q9NUP1 217 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 AGO2Q9UKV8 859 aaKnown RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 PPP1R12AO14974 1030 aaPredicted RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 ATP6V1G2O95670 118 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 HNRNPH3P31942 346 aaKnown RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 TMEM132BQ14DG7 1078 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 SLC17A8Q8NDX2 589 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 ARMC2Q8NEN0 867 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 C7orf43Q8WVR3 580 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 MRRFQ96E11 262 aaKnown RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 MED10Q9BTT4 135 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 TRIM7Q9C029 511 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 RBAKQ9NYW8 714 aaPredicted RBP12.05□□□□□ -0.48
PTCH2-203ENST00000447098 HSPBP1Q9NZL4 362 aa12.05□□□□□ -0.48
PTCH2-203ENST00000447098 NID2Q14112 1375 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 EIF4E1BA6NMX2 242 aaKnown RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 GTF2A2P52657 109 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 DRAP1Q14919 205 aaPredicted RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 TRAPPC12Q8WVT3 735 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 STAMBPL1Q96FJ0 436 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 WDR18Q9BV38 432 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 RANBP17Q9H2T7 1088 aaKnown RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 HOMER3Q9NSC5 361 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 PDXKO00764 312 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 DIAPH2O60879 1101 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 P4HA1P13674 534 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 GIT2Q14161 759 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 NPY5RQ15761 445 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 GJB7Q6PEY0 223 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 HACE1Q8IYU2 909 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 UBL4BQ8N7F7 174 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 FBF1Q8TES7 1133 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 TRIM51Q9BSJ1 452 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 MTUS1Q9ULD2 1270 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 PPP2R3BQ9Y5P8 575 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 TLR3O15455 904 aaKnown RBP12.04□□□□□ -0.48
PTCH2-203ENST00000447098 ATP9AO75110 1047 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 SUN1O94901 812 aa12.04□□□□□ -0.48
PTCH2-203ENST00000447098 IFNB1P01574 187 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms