RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 POU2F2P09086 479 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 GBP1P32455 592 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 KPNA1P52294 538 aaPredicted RBP16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 MLLT6P55198 1093 aaPredicted RBP16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 SEMA3BQ13214 749 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 CCINQ13939 588 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 FUT10Q6P4F1 479 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 GPR65Q8IYL9 337 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 ZNF710Q8N1W2 664 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 APOL6Q9BWW8 343 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 RIOX1Q9H6W3 641 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 SLC8A2Q9UPR5 921 aa16.08■□□□□ 0.16
SYNCRIP-203ENST00000444272 VWA8A3KMH1 1905 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 ARNTLO00327 626 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 ZNF862O60290 1169 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 KRT38O76015 456 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 RHOP08100 348 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 ITGB3BPQ13352 177 aaPredicted RBP16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 PON2Q15165 354 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 AXDND1Q5T1B0 1012 aaPredicted RBP16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 ABHD15Q6UXT9 468 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 CYP2U1Q7Z449 544 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 SCUBE3Q8IX30 993 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 FAM200AQ8TCP9 573 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 MYH9P35579 1960 aaKnown RBP16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 THADAQ6YHU6 1953 aa16.07■□□□□ 0.16
SYNCRIP-203ENST00000444272 ABCA7Q8IZY2 2146 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 MAGEB2O15479 319 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 CYTH3O43739 400 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 CCNE2O96020 404 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 LMAN2Q12907 356 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 KARSQ15046 597 aaKnown RBP16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 SWSAP1Q6NVH7 229 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 SYNPOQ8N3V7 929 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 PNPLA1Q8N8W4 532 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 DEPDC1BQ8WUY9 529 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 ADAMTS14Q8WXS8 1223 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 ASB16Q96NS5 453 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 C8orf33Q9H7E9 229 aaPredicted RBP16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 DKK4Q9UBT3 224 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 CEP131Q9UPN4 1083 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 RELNP78509 3460 aa16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
SYNCRIP-203ENST00000444272 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 CAPN8A6NHC0 703 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 UPK3BL1B0FP48 263 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 UPK3BL2E5RIL1 263 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 SPECC1L-ADORA2AF8WAN1 911 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 SFPQP23246 707 aaKnown RBP eCLIP16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 VIPR2P41587 438 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 TRIM61Q5EBN2 209 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 RTP2Q5QGT7 225 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 HHIPQ96QV1 700 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 CLSTN3Q9BQT9 956 aa16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 GCOM2Q9BZD3 368 aaPredicted RBP16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
SYNCRIP-203ENST00000444272 PTPRBP23467 1997 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 NCANO14594 1321 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 ENGP17813 658 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 CTHP32929 405 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 KIF5BP33176 963 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 PMS2CLQ68D20 193 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 CAMKK1Q8N5S9 505 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 FAM181AQ8N9Y4 354 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 TTC8Q8TAM2 541 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 COLEC11Q9BWP8 271 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 PRORYQ9H606 182 aa16.04■□□□□ 0.16
SYNCRIP-203ENST00000444272 ATG2BQ96BY7 2078 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 MYBPHLA2RUH7 354 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 ADAM12O43184 909 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 NR1I2O75469 434 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 WISP1O95388 367 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 CYP4F3Q08477 520 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 DSC1Q08554 894 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 IFIT1BQ5T764 474 aaKnown RBP16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 HDDC3Q8N4P3 179 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 PIGKQ92643 395 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 SMARCD2Q92925 531 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 TCEAL4Q96EI5 215 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 NUSAP1Q9BXS6 441 aaKnown RBP16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 EVLQ9UI08 416 aaPredicted RBP16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 ADAM28Q9UKQ2 775 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 INVSQ9Y283 1065 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 SPTAN1Q13813 2472 aaKnown RBP16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 MGAQ8IWI9 3026 aa16.03■□□□□ 0.16
SYNCRIP-203ENST00000444272 ADAMTS9Q9P2N4 1935 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 WDR27A2RRH5 827 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 FTH1P19P0C7X4 201 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms