RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ARHGEF38Q9NXL2 777 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 FCHO1O14526 889 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ZBED4O75132 1171 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ETS2P15036 469 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 VEGFAP15692 232 aaPredicted RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 BTKQ06187 659 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 PDIA2Q13087 525 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 RIBC1Q8N443 379 aaPredicted RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 ZFRQ96KR1 1074 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 DLC1Q96QB1 1528 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 TACC3Q9Y6A5 838 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ORC2Q13416 577 aaPredicted RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 GANQ9H2C0 597 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 PCDH18Q9HCL0 1135 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 TAGLN3Q9UI15 199 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ERCC6L2Q5T890 1561 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 TNRQ92752 1358 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 PFASO15067 1338 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 TBC1D23Q9NUY8 699 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 HEG1Q9ULI3 1381 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 MAGEB2O15479 319 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CHADLQ6NUI6 762 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CLNKQ7Z7G1 428 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 MYCT1Q8N699 235 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 STX8Q9UNK0 236 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 FAM196BA6NMK8 535 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 PHBP35232 272 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 MED21Q13503 144 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 KBTBD12Q3ZCT8 623 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CERKLQ49MI3 558 aaPredicted RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 DZIP1Q86YF9 867 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 TTLL1O95922 423 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ATP6V1B1P15313 513 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 YARSP54577 528 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 KDSRQ06136 332 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 GPS1Q13098 491 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 RASA2Q15283 850 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CCDC80Q76M96 950 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 THTPAQ9BU02 230 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CADM1Q9BY67 442 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.33□□□□□ -1.564e-7■■■■■ 93.6
HERC1-201ENST00000443617 HOMER2Q9NSB8 354 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 PPRC1Q5VV67 1664 aaKnown RBP5.33□□□□□ -1.56
HERC1-201ENST00000443617 SERPINB8P50452 374 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ERFP50548 548 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 PNMA1Q8ND90 353 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 ACTL7BQ9Y614 415 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 NCANO14594 1321 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 EVA1CP58658 441 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 KRT17Q04695 432 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 DGKHQ86XP1 1220 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 DAGLBQ8NCG7 672 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 CAMSAP1Q5T5Y3 1602 aa5.33□□□□□ -1.56
HERC1-201ENST00000443617 F8W8V4 182 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ZSCAN9O15535 394 aaPredicted RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 PPP1R1BQ9UD71 204 aaPredicted RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 ZNF232Q9UNY5 417 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CLPTM1O96005 669 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 DLATP10515 647 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 CTNNA2P26232 953 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 LIN52Q52LA3 116 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 UTP4Q969X6 686 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 PCDHGA4Q9Y5G9 962 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TRIP10Q15642 601 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CAPN12Q6ZSI9 719 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CROCCP3Q8IVE0 287 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CACNA1FO60840 1977 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PDE5AO76074 875 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 GH1P01241 217 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ZMAT2Q96NC0 199 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 ISCA1Q9BUE6 129 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 LRRC4CQ9HCJ2 640 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TMOD3Q9NYL9 352 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TMEM2Q9UHN6 1383 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ENO1P06733 434 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 SLC9A1P19634 815 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 GJC1P36383 396 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CACNB1Q02641 598 aaPredicted RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 ZDHHC24Q6UX98 284 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 RIPOR1Q6ZS17 1223 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TSHZ1Q6ZSZ6 1077 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PATL1Q86TB9 770 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 AGPAT1Q99943 283 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 HEMGNQ9BXL5 484 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PFDN4Q9NQP4 134 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 GSTO1P78417 241 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 POU5F1Q01860 360 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 USH1GQ495M9 461 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 DNAL1Q4LDG9 190 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TSSK1BQ9BXA7 367 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 GPAMQ9HCL2 828 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 WDR37Q9Y2I8 494 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 WASF2Q9Y6W5 498 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PDE4DIPQ5VU43 2346 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ALKQ9UM73 1620 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PTPRUQ92729 1446 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 USP17L3A6NCW0 530 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 USP17L4A6NCW7 530 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TRAFD1O14545 582 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms