RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 CAPN6Q9Y6Q1 641 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 PFDN6O15212 129 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 MMS22LQ6ZRQ5 1243 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 RBBP8NLQ8NC74 664 aaPredicted RBP23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 TARS2Q9BW92 718 aaKnown RBP23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 VIPAS39Q9H9C1 493 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 ASB14A6NK59 587 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 MYCP01106 439 aaPredicted RBP23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 HLA-DRAP01903 254 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 SARSP49591 514 aaKnown RBP23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 THOC5Q13769 683 aaKnown RBP23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 GPRC5CQ9NQ84 441 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 TXLNGQ9NUQ3 528 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 COPEO14579 308 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 TMEM253P0C7T8 217 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 KRT3P12035 628 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 MMEL1Q495T6 779 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 SPOPLQ6IQ16 392 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 PPM1NQ8N819 430 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 AGBL3Q8NEM8 1001 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 TTC25Q96NG3 672 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 LRFN2Q9ULH4 789 aa23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 G3BP2Q9UN86 482 aaKnown RBP23.81■■□□□ 1.4
CTDSPL-206ENST00000443503 CYTH3O43739 400 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 RPSAP08865 295 aaKnown RBP23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 SHMT1P34896 483 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 SERPINB6P35237 376 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 EHD4Q9H223 541 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 FASTKD5Q7L8L6 764 aaKnown RBP23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 ZC3H18Q86VM9 953 aaKnown RBP23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 GCOM2Q9BZD3 368 aaPredicted RBP23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 LCMT1Q9UIC8 334 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 A0A0G2JND7 137 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 MAFGO15525 162 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 ICAM1P05362 532 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 COMTP21964 271 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 ADORA2BP29275 332 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 GIT2Q14161 759 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 TRIM65Q6PJ69 517 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 ZNF710Q8N1W2 664 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 ATL2Q8NHH9 583 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 C18orf8Q96DM3 657 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 TMEM117Q9H0C3 514 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 DHX35Q9H5Z1 703 aaKnown RBP23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 ANKEF1Q9NU02 776 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 PCDHB2Q9Y5E7 798 aa23.8■■□□□ 1.4
CTDSPL-206ENST00000443503 SHPRHQ149N8 1683 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 GNAT1P11488 350 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 ARSEP51690 589 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 TMPRSS15P98073 1019 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 SH2D4BQ5SQS7 431 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 SLC30A10Q6XR72 485 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 TMEM8AQ9HCN3 771 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 ABT1Q9ULW3 272 aaKnown RBP23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 AGAP1Q9UPQ3 857 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 FIGNQ5HY92 759 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 KCNV1Q6PIU1 500 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 TADA2BQ86TJ2 420 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 NLRP14Q86W24 1093 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 SCFD1Q8WVM8 642 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 GMCL1Q96IK5 515 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 SPDYE2BA6NHP3 402 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 KRT38O76015 456 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 SPDYE6P0CI01 402 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 TAL1P17542 331 aaPredicted RBP23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 SLC1A1P43005 524 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 DDX4Q9NQI0 724 aaKnown RBP23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 FIS1Q9Y3D6 152 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 F5H423 210 aaPredicted RBP23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 COPB2P35606 906 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 USP38Q8NB14 1042 aa23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 CELF4Q9BZC1 486 aaKnown RBP23.79■■□□□ 1.4
CTDSPL-206ENST00000443503 MAPK13O15264 365 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 CREB3O43889 395 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 VEGFAP15692 232 aaPredicted RBP23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 PON1P27169 355 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 MXD4Q14582 209 aaPredicted RBP23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 TKFCQ3LXA3 575 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 PIK3R2O00459 728 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 LPXNO60711 386 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 ESRRAP11474 423 aaPredicted RBP23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 KCNJ1P48048 391 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 NR1H3Q13133 447 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 LRRC71Q8N4P6 559 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 CYP26B1Q9NR63 512 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 DDX56Q9NY93 547 aaKnown RBP23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 TMX2Q9Y320 296 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 IGSF9BQ9UPX0 1349 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 R3HDM1Q15032 1099 aaKnown RBP23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 OR2W6PQ8NHA6 318 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 ZKSCAN4Q969J2 545 aaPredicted RBP23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 PNKPQ96T60 521 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 HPCAL4Q9UM19 191 aa23.78■■□□□ 1.4
CTDSPL-206ENST00000443503 GUCY2CP25092 1073 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 NOP14P78316 857 aaKnown RBP23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 SCN4BQ8IWT1 228 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 KIAA0895Q8NCT3 520 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 RUBCNQ92622 972 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 DDX23Q9BUQ8 820 aaKnown RBP23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 STAP1Q9ULZ2 295 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms