RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SORCS3Q9UPU3 1222 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 DNM3Q9UQ16 869 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 PLXNA4Q9HCM2 1894 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 ARL5CA6NH57 179 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 USO1O60763 962 aaKnown RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 GLRA2P23416 452 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 PBX3P40426 434 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 NAMPTP43490 491 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 GLUD2P49448 558 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 MBTD1Q05BQ5 628 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 PRPF4BQ13523 1007 aaKnown RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 CAPSQ13938 189 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 ZNF174Q15697 407 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 USP41Q3LFD5 358 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 DCAF4L1Q3SXM0 396 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 LONRF3Q496Y0 759 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 EARS2Q5JPH6 523 aaKnown RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 KRT79Q5XKE5 535 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 CCDC149Q6ZUS6 474 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 GPR149Q86SP6 731 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 CATSPER3Q86XQ3 398 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 CCDC83Q8IWF9 413 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 COLGALT2Q8IYK4 626 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 PIGOQ8TEQ8 1089 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 GAD1Q99259 594 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 RXFP1Q9HBX9 757 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 FNIP2Q9P278 1114 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 WRAP73Q9P2S5 460 aaPredicted RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 LRWD1Q9UFC0 647 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 XIRP2A4UGR9 3374 aa8.59□□□□□ -1.04
CD44-211ENST00000442151 TRANK1O15050 2925 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 ACKR2O00590 384 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 SLC26A4O43511 780 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 TRAPPC3O43617 180 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 JAK2O60674 1132 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 DDHD2O94830 711 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 GLUD1P00367 558 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 THP07101 528 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 ARF4P18085 180 aaPredicted RBP8.58□□□□□ -1.04
CD44-211ENST00000442151 SCP2P22307 547 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 CCT6AP40227 531 aaKnown RBP8.58□□□□□ -1.04
CD44-211ENST00000442151 RABEP1Q15276 862 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 PTPN14Q15678 1187 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 PADI6Q6TGC4 694 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 DTHD1Q6ZMT9 781 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 ZNF280BQ86YH2 543 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
CD44-211ENST00000442151 APOL5Q9BWW9 433 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 FZD8Q9H461 694 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 MINDY3Q9H8M7 445 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 C17orf75Q9HAS0 396 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 PIDD1Q9HB75 910 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 IL21Q9HBE4 155 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 XPNPEP1Q9NQW7 623 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 IGSF9Q9P2J2 1179 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 DNAJB4Q9UDY4 337 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 ZFP37Q9Y6Q3 630 aaPredicted RBP8.58□□□□□ -1.04
CD44-211ENST00000442151 CHD7Q9P2D1 2997 aa8.58□□□□□ -1.04
CD44-211ENST00000442151 H0YCG3 227 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 K7ERI5 159 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 STK25O00506 426 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 NPTXRO95502 500 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 CNPP09543 421 aaKnown RBP8.57□□□□□ -1.04
CD44-211ENST00000442151 SPATA31C1P0DKV0 1188 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 ABCD1P33897 745 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 PRPHP41219 470 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 CLCN4P51793 760 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 YARSP54577 528 aaKnown RBP8.57□□□□□ -1.04
CD44-211ENST00000442151 DSG1Q02413 1049 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 DSC1Q08554 894 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 TUSC3Q13454 348 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 KREMEN2Q8NCW0 462 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 ASAP3Q8TDY4 903 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 CPB2Q96IY4 423 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 DRC1Q96MC2 740 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 UROC1Q96N76 676 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 APOL6Q9BWW8 343 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 ZDHHC7Q9NXF8 308 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 RAPGEFL1Q9UHV5 662 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 PRG3Q9Y2Y8 225 aaPredicted RBP8.57□□□□□ -1.04
CD44-211ENST00000442151 SF3B1O75533 1304 aaKnown RBP eCLIP8.57□□□□□ -1.048e-6■■■■■ 107
CD44-211ENST00000442151 MYO7AQ13402 2215 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 REV3LO60673 3130 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 BRWD1Q9NSI6 2320 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 H3BQV1 296 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 ZBTB39O15060 712 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 LILRB3O75022 631 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 PPP1R37O75864 691 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 LARGE1O95461 756 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 PRKCBP05771 671 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 EPCAMP16422 314 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 MLH1P40692 756 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 SMTNP53814 917 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 RILPL1Q5EBL4 403 aa8.57□□□□□ -1.04
CD44-211ENST00000442151 KIAA0319Q5VV43 1072 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms