RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 OLFML3Q9NRN5 406 aa19.76■□□□□ 0.75
CPSF4-205ENST00000440514 CHMP5Q9NZZ3 219 aa19.76■□□□□ 0.75
CPSF4-205ENST00000440514 TISP43B9A030 160 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 GCNT3O95395 438 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 PIGRP01833 764 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 SLFN14P0C7P3 912 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 SCP2P22307 547 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 PPM1AP35813 382 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 MATR3P43243 847 aaKnown RBP eCLIP19.75■□□□□ 0.75
CPSF4-205ENST00000440514 SYKP43405 635 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 CUL4BQ13620 913 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 CAMK1Q14012 370 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 CSPP1Q1MSJ5 1256 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 SEZ6Q53EL9 994 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 SLC39A4Q6P5W5 647 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 ZNF720Q7Z2F6 126 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 SLC17A8Q8NDX2 589 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 BCL7CQ8WUZ0 217 aaPredicted RBP19.75■□□□□ 0.75
CPSF4-205ENST00000440514 POF1BQ8WVV4 589 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 FAM193BQ96PV7 902 aaPredicted RBP19.75■□□□□ 0.75
CPSF4-205ENST00000440514 LMAN2LQ9H0V9 348 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 LMCD1Q9NZU5 365 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 KANSL3Q9P2N6 904 aa19.75■□□□□ 0.75
CPSF4-205ENST00000440514 PTGESO14684 152 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 MCL1Q07820 350 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 KCNA1Q09470 495 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 GRIK3Q13003 919 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 CNNM4Q6P4Q7 775 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 GLIS3Q8NEA6 775 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 HVCN1Q96D96 273 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 PAGE5Q96GU1 130 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 CCDC94Q9BW85 323 aaPredicted RBP19.74■□□□□ 0.75
CPSF4-205ENST00000440514 STRA6Q9BX79 667 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 SPG21Q9NZD8 308 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 PCDHGC5Q9Y5F6 944 aa19.74■□□□□ 0.75
CPSF4-205ENST00000440514 ANKRD63C9JTQ0 380 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 CLDN3O15551 220 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 GALTP07902 379 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 ABCD1P33897 745 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 IRS1P35568 1242 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 ALDH7A1P49419 539 aaKnown RBP19.73■□□□□ 0.75
CPSF4-205ENST00000440514 DSC1Q08554 894 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 TIGD5Q53EQ6 642 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 GLRA4Q5JXX5 417 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 L1TD1Q5T7N2 865 aaKnown RBP19.73■□□□□ 0.75
CPSF4-205ENST00000440514 COLGALT2Q8IYK4 626 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 CACNG4Q9UBN1 327 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 USP25Q9UHP3 1055 aa19.73■□□□□ 0.75
CPSF4-205ENST00000440514 PRG3Q9Y2Y8 225 aaPredicted RBP19.73■□□□□ 0.75
CPSF4-205ENST00000440514 F8W810 466 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 MEFVO15553 781 aaPredicted RBP19.72■□□□□ 0.75
CPSF4-205ENST00000440514 PRR29P0C7W0 189 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 YARSP54577 528 aaKnown RBP19.72■□□□□ 0.75
CPSF4-205ENST00000440514 PLCB3Q01970 1234 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 ZBTB41Q5SVQ8 909 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 UNC13DQ70J99 1090 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 SNX27Q96L92 541 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 TMEM175Q9BSA9 504 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 PRDM6Q9NQX0 595 aa19.72■□□□□ 0.75
CPSF4-205ENST00000440514 CITO14578 2027 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 EYSQ5T1H1 3165 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 GOLGA6L4A6NEF3 574 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 NRP1O14786 923 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 PRPF6O94906 941 aaKnown RBP19.71■□□□□ 0.75
CPSF4-205ENST00000440514 TNFSF9P41273 254 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 OR1G1P47890 313 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 ERVFC1P60507 584 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 UBE3AQ05086 875 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 SKIV2LQ15477 1246 aaKnown RBP19.71■□□□□ 0.75
CPSF4-205ENST00000440514 TCEAL5Q5H9L2 206 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 FAM26FQ5R3K3 315 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 KRBA2Q6ZNG9 492 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 RABGGTAQ92696 567 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 TMEM169Q96HH4 297 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 IGSF21Q96ID5 467 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 ACCSQ96QU6 501 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 NSUN3Q9H649 340 aaKnown RBP19.71■□□□□ 0.75
CPSF4-205ENST00000440514 TLR9Q9NR96 1032 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 TOPORSQ9NS56 1045 aaPredicted RBP19.71■□□□□ 0.75
CPSF4-205ENST00000440514 MARCH5Q9NX47 278 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 LZTS1Q9Y250 596 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 TRIP11Q15643 1979 aa19.71■□□□□ 0.75
CPSF4-205ENST00000440514 PDCD11Q14690 1871 aaKnown RBP19.71■□□□□ 0.75
CPSF4-205ENST00000440514 COL6A3P12111 3177 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 CASTOR2A6NHX0 329 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 FAM189A1O60320 539 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 CXCL8P10145 99 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 KRT17Q04695 432 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 EHHADHQ08426 723 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 ALCAMQ13740 583 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 NAB2Q15742 525 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 PLPP4Q5VZY2 271 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 ACAP3Q96P50 834 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 MSTO1Q9BUK6 570 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 VN1R3Q9BXE9 311 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 FAN1Q9Y2M0 1017 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 PCDHB13Q9Y5F0 798 aa19.7■□□□□ 0.74
CPSF4-205ENST00000440514 A0A0B4J269 797 aa19.69■□□□□ 0.74
CPSF4-205ENST00000440514 OGTO15294 1046 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms