RNA–Protein interactions for RNA: ENST00000439928.2

SPATA13-213, Transcript of spermatogenesis associated 13, humanhuman

TSL 1 (best) BASIC

Gene SPATA13, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-213ENST00000439928 TRIM49P0CI25 452 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 TRIM49CP0CI26 452 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 DLATP10515 647 aaKnown RBP13.19□□□□□ -0.3
SPATA13-213ENST00000439928 CKBP12277 381 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 ATN1P54259 1190 aaPredicted RBP13.19□□□□□ -0.3
SPATA13-213ENST00000439928 ENPEPQ07075 957 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 BFSP2Q13515 415 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 EEF1DP3Q658K8 133 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
SPATA13-213ENST00000439928 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
SPATA13-213ENST00000439928 NOC2LQ9Y3T9 749 aaKnown RBP13.19□□□□□ -0.3
SPATA13-213ENST00000439928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPATA13-213ENST00000439928 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
SPATA13-213ENST00000439928 OSTNP61366 133 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 NFX1Q12986 1120 aaKnown RBP13.18□□□□□ -0.3
SPATA13-213ENST00000439928 PAK2Q13177 524 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 TRIM14Q14142 442 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 SYCP1Q15431 976 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 TRIM71Q2Q1W2 868 aaKnown RBP13.18□□□□□ -0.3
SPATA13-213ENST00000439928 ZNF618Q5T7W0 954 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 SLC39A5Q6ZMH5 540 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 USP38Q8NB14 1042 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 TMC2Q8TDI7 906 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 ERGIC2Q96RQ1 377 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
SPATA13-213ENST00000439928 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
SPATA13-213ENST00000439928 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 FAM189A1O60320 539 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 NPTXRO95502 500 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 TNNI1P19237 187 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
SPATA13-213ENST00000439928 PBX1P40424 430 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 FMO5P49326 533 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 DLG4P78352 724 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 MYL7Q01449 175 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 PSMD6Q15008 389 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 SURF1Q15526 300 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 SEZ6Q53EL9 994 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
SPATA13-213ENST00000439928 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
SPATA13-213ENST00000439928 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 CCDC94Q9BW85 323 aaPredicted RBP13.17□□□□□ -0.3
SPATA13-213ENST00000439928 MCOLN1Q9GZU1 580 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 RPF1Q9H9Y2 349 aaKnown RBP13.17□□□□□ -0.3
SPATA13-213ENST00000439928 GCNT4Q9P109 453 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 CPSF3Q9UKF6 684 aaKnown RBP13.17□□□□□ -0.3
SPATA13-213ENST00000439928 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
SPATA13-213ENST00000439928 CD4P01730 458 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 CLTAP09496 248 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 GHRP10912 638 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
SPATA13-213ENST00000439928 TNFSF9P41273 254 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
SPATA13-213ENST00000439928 MXI1P50539 228 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 GSDMDP57764 484 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 EXOC3L4Q17RC7 722 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 FBXO47Q5MNV8 452 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 GBP6Q6ZN66 633 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 ANKRD33Q7Z3H0 272 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 CEP120Q8N960 986 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 DIS3LQ8TF46 1054 aaKnown RBP13.16□□□□□ -0.3
SPATA13-213ENST00000439928 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 CRACR2AQ9BSW2 395 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 NUP58Q9BVL2 599 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 C11orf49Q9H6J7 331 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 LRRIQ3A6PVS8 624 aaPredicted RBP13.16□□□□□ -0.3
SPATA13-213ENST00000439928 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 IL18RAPO95256 599 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 COL6A1P12109 1028 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 GTF2H1P32780 548 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 GCLMP48507 274 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 RBL2Q08999 1139 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 LRRC8DQ7L1W4 858 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 NECAB2Q7Z6G3 386 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 NEK11Q8NG66 645 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 TOX2Q96NM4 488 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 ACAP3Q96P50 834 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 TMEM8AQ9HCN3 771 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 PDE11AQ9HCR9 933 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
SPATA13-213ENST00000439928 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
SPATA13-213ENST00000439928 P4HA2O15460 535 aa13.15□□□□□ -0.3
SPATA13-213ENST00000439928 CXCL8P10145 99 aa13.15□□□□□ -0.3
SPATA13-213ENST00000439928 SELPP16109 830 aa13.15□□□□□ -0.3
SPATA13-213ENST00000439928 CD52P31358 61 aa13.15□□□□□ -0.3
SPATA13-213ENST00000439928 GRM5P41594 1212 aa13.15□□□□□ -0.3
SPATA13-213ENST00000439928 YARSP54577 528 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms