RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 M0R296 226 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 TEX28O15482 410 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 HIP1RO75146 1068 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 RECQL4O94761 1208 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 C1RP00736 705 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 YARSP54577 528 aaKnown RBP20.69■□□□□ 0.9
CCDC78-204ENST00000439619 PEX3P56589 373 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 SIGLEC14Q08ET2 396 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 ELAVL2Q12926 359 aaKnown RBP20.69■□□□□ 0.9
CCDC78-204ENST00000439619 KIAA0319Q5VV43 1072 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 CYP26C1Q6V0L0 522 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 C15orf39Q6ZRI6 1047 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 TAS1R1Q7RTX1 841 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 BMP8AQ7Z5Y6 402 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 GPR149Q86SP6 731 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 SUGP1Q8IWZ8 645 aaKnown RBP20.69■□□□□ 0.9
CCDC78-204ENST00000439619 RNF168Q8IYW5 571 aaPredicted RBP20.69■□□□□ 0.9
CCDC78-204ENST00000439619 PBXIP1Q96AQ6 731 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 RXFP1Q9HBX9 757 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 KMT5AQ9NQR1 393 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 TOPORSQ9NS56 1045 aaPredicted RBP20.69■□□□□ 0.9
CCDC78-204ENST00000439619 CHST7Q9NS84 486 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 GDAQ9Y2T3 454 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 VWA3AA6NCI4 1184 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 BMP15O95972 392 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 WEE2P0C1S8 567 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 CDC25AP30304 524 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 NPTX2P47972 431 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 MTMR3Q13615 1198 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 IL17AQ16552 155 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 RINT1Q6NUQ1 792 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 CCDC149Q6ZUS6 474 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 OTOP3Q7RTS5 596 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 HDAC7Q8WUI4 952 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 CCDC94Q9BW85 323 aaPredicted RBP20.68■□□□□ 0.9
CCDC78-204ENST00000439619 MRPL4Q9BYD3 311 aaKnown RBP20.68■□□□□ 0.9
CCDC78-204ENST00000439619 TMEM134Q9H6X4 195 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 POLD4Q9HCU8 107 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 MAN1C1Q9NR34 630 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 KCND2Q9NZV8 630 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 TNFSF13BQ9Y275 285 aa20.68■□□□□ 0.9
CCDC78-204ENST00000439619 TTLL13PA6NNM8 815 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 C2CD4DB7Z1M9 353 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 CD2BP2O95400 341 aaKnown RBP20.67■□□□□ 0.9
CCDC78-204ENST00000439619 SMTNP53814 917 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 STRN3Q13033 797 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 PDXDC1Q6P996 788 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 UBALD2Q8IYN6 164 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 ZDHHC14Q8IZN3 488 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 CMASQ8NFW8 434 aaPredicted RBP20.67■□□□□ 0.9
CCDC78-204ENST00000439619 RIN2Q8WYP3 895 aaPredicted RBP20.67■□□□□ 0.9
CCDC78-204ENST00000439619 AK8Q96MA6 479 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 TCHPQ9BT92 498 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 GPR62Q9BZJ7 368 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 PLEKHA4Q9H4M7 779 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 FNIP2Q9P278 1114 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 CDH22Q9UJ99 828 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 SORCS3Q9UPU3 1222 aa20.67■□□□□ 0.9
CCDC78-204ENST00000439619 CASTOR2A6NHX0 329 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 SLC26A4O43511 780 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 EFEMP2O95967 443 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 PDCP20941 246 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 GUCY2CP25092 1073 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 ZNF568Q3ZCX4 644 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 HYIQ5T013 277 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 NT5DC1Q5TFE4 455 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 EEF1DP3Q658K8 133 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 BRAPQ7Z569 592 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 STAMQ92783 540 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 CALML4Q96GE6 196 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 RUSC1Q9BVN2 902 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 USP20Q9Y2K6 914 aa20.66■□□□□ 0.9
CCDC78-204ENST00000439619 F8W810 466 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 H0YCG3 227 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 PTGESO14684 152 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 UBA7P41226 1012 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 KANK3Q6NY19 840 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 C1orf186Q6ZWK4 172 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 SYT2Q8N9I0 419 aaPredicted RBP20.65■□□□□ 0.9
CCDC78-204ENST00000439619 KREMEN2Q8NCW0 462 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 RASSF8Q8NHQ8 419 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 RABGGTAQ92696 567 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 UROC1Q96N76 676 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 TTPALQ9BTX7 342 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 MMTAG2Q9BU76 263 aaKnown RBP20.65■□□□□ 0.9
CCDC78-204ENST00000439619 C5orf42Q9H799 3197 aa20.65■□□□□ 0.9
CCDC78-204ENST00000439619 CCDC195A0A1B0GUA6 201 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 TRAPPC3O43617 180 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 FAM171A1Q5VUB5 890 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 CEP57Q86XR8 500 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 PALB2Q86YC2 1186 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 HASPINQ8TF76 798 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 SPIRE2Q8WWL2 714 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 B3GALT6Q96L58 329 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 ACO2Q99798 780 aaKnown RBP20.64■□□□□ 0.89
CCDC78-204ENST00000439619 PRRX2Q99811 253 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 RHOBTB2Q9BYZ6 727 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 PIDD1Q9HB75 910 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 SLC38A7Q9NVC3 462 aa20.64■□□□□ 0.89
CCDC78-204ENST00000439619 ARHGAP28Q9P2N2 729 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms