RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 C15orf39Q6ZRI6 1047 aa20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 UBALD2Q8IYN6 164 aa20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 RNF168Q8IYW5 571 aaPredicted RBP20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 ZDHHC14Q8IZN3 488 aa20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 RABGGTAQ92696 567 aa20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 B3GALT6Q96L58 329 aa20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 DAXXQ9UER7 740 aaPredicted RBP20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 USP20Q9Y2K6 914 aa20.33■□□□□ 0.85
AC004540.1-201ENST00000439120 PLXNA3P51805 1871 aa20.33■□□□□ 0.84
AC004540.1-201ENST00000439120 CASTOR2A6NHX0 329 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 K7ERI5 159 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 ZRSR1Q15695 479 aaKnown RBP20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 ATF7IP2Q5U623 682 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 OTOP3Q7RTS5 596 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 RIN2Q8WYP3 895 aaPredicted RBP20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 TMX3Q96JJ7 454 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 GPR62Q9BZJ7 368 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 RXFP1Q9HBX9 757 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 CHST7Q9NS84 486 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 LIMD1Q9UGP4 676 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 GDAQ9Y2T3 454 aa20.32■□□□□ 0.84
AC004540.1-201ENST00000439120 DENND4AQ7Z401 1863 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 PP2D1A8MPX8 630 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 E9PMD0 336 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 EFEMP2O95967 443 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 MYBP10242 640 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 GJB2P29033 226 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 PALB2Q86YC2 1186 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 HASPINQ8TF76 798 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 ASIC4Q96FT7 647 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 DRC1Q96MC2 740 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 PRRX2Q99811 253 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 CACNG4Q9UBN1 327 aa20.31■□□□□ 0.84
AC004540.1-201ENST00000439120 PHLPP2Q6ZVD8 1323 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 CCDC195A0A1B0GUA6 201 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 HIP1RO75146 1068 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 ASGR2P07307 311 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 CDC25AP30304 524 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 MCM2P49736 904 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 PEX3P56589 373 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 EEF1DP3Q658K8 133 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 GPR65Q8IYL9 337 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 CMASQ8NFW8 434 aaPredicted RBP20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 STAMQ92783 540 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 PAAF1Q9BRP4 392 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 PLEKHA4Q9H4M7 779 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 FNIP2Q9P278 1114 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 C2orf16Q68DN1 1984 aa20.3■□□□□ 0.84
AC004540.1-201ENST00000439120 PTGESO14684 152 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 KIF4AO95239 1232 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 BRD1O95696 1058 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 EDN1P05305 212 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 SPATA31D3P0C874 917 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 NPTX2P47972 431 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 NT5DC1Q5TFE4 455 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 CYP26C1Q6V0L0 522 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 SPATA31D4Q6ZUB0 917 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 CEP57Q86XR8 500 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 HDAC7Q8WUI4 952 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 CDK5RAP3Q96JB5 506 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 PIDD1Q9HB75 910 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 KMT5AQ9NQR1 393 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
AC004540.1-201ENST00000439120 MUC6Q6W4X9 2439 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 TGM5O43548 720 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 YARSP54577 528 aaKnown RBP20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 ATP2C1P98194 919 aaPredicted RBP20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 NHLH1Q02575 133 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 ELAVL2Q12926 359 aaKnown RBP20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 IL17AQ16552 155 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 ZNF568Q3ZCX4 644 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 FAM171A1Q5VUB5 890 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 FEZF2Q8TBJ5 459 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 SMG7Q92540 1137 aaKnown RBP20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 TTPALQ9BTX7 342 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 TIPINQ9BVW5 301 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 MRPL4Q9BYD3 311 aaKnown RBP20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 NT5C3AQ9H0P0 336 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 TOPORSQ9NS56 1045 aaPredicted RBP20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 TNFSF13BQ9Y275 285 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 ZNF318Q5VUA4 2279 aa20.28■□□□□ 0.84
AC004540.1-201ENST00000439120 VWA3AA6NCI4 1184 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 RFPL2O75678 378 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 C1RP00736 705 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 RPL17P18621 184 aaKnown RBP20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 GBP2P32456 591 aaPredicted RBP20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 PTPN5P54829 565 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 RINT1Q6NUQ1 792 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 PDXDC1Q6P996 788 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 PRSS55Q6UWB4 352 aaPredicted RBP20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 TCHPQ9BT92 498 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 RUSC1Q9BVN2 902 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 CCDC94Q9BW85 323 aaPredicted RBP20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 C17orf75Q9HAS0 396 aa20.27■□□□□ 0.84
AC004540.1-201ENST00000439120 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms