RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PDIA2Q13087 525 aaKnown RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 PRKG1Q13976 671 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 MAP3K21Q5TCX8 1036 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 BTNL9Q6UXG8 535 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 ZBED8Q8IZ13 594 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 CDKL2Q92772 493 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 TTC17Q96AE7 1141 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 RBM15Q96T37 977 aaKnown RBP eCLIP7.11□□□□□ -1.273e-7■■■■□ 23.4
CSDE1-205ENST00000438362 INO80BQ9C086 356 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 ZWILCHQ9H900 591 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 GABBR1Q9UBS5 961 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 DDX20Q9UHI6 824 aaKnown RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 KIF1AQ12756 1690 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 NALCNQ8IZF0 1738 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 GYG2O15488 501 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 CPP00450 1065 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 LMNAP02545 664 aaKnown RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 NFIAQ12857 509 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 SURF1Q15526 300 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 KLHL38Q2WGJ6 581 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 RASIP1Q5U651 963 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 STRIP1Q5VSL9 837 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 SCARA5Q6ZMJ2 495 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 ZBTB33Q86T24 672 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 NT5DC3Q86UY8 548 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 SUGP1Q8IWZ8 645 aaKnown RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 KCNV2Q8TDN2 545 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 DDX23Q9BUQ8 820 aaKnown RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 TRABDQ9H4I3 376 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 STOML1Q9UBI4 398 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 DCTN4Q9UJW0 460 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 TOPAZ1Q8N9V7 1692 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 CAMTA1Q9Y6Y1 1673 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 KRT37O76014 449 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 PRKCIP41743 596 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 ARSEP51690 589 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 PDE1BQ01064 536 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 Q4G0T1 1027 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 ZNF720Q7Z2F6 126 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 SMC1BQ8NDV3 1235 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 MAML1Q92585 1016 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 FAM163AQ96GL9 167 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 SERPINB12Q96P63 405 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 INPP4AQ96PE3 977 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-205ENST00000438362 FOXP3Q9BZS1 431 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 TTYH3Q9C0H2 523 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 POLLQ9UGP5 575 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 BCAP29Q9UHQ4 241 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 SCOCQ9UIL1 159 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 FAM47DPA6NHR8 397 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 RGL2O15211 777 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ENTPD3O75355 529 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 HAUS5O94927 633 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 IL1R1P14778 569 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ITGA8P53708 1063 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 FOXR2Q6PJQ5 311 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 SEPT14Q6ZU15 432 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 TRIM50Q86XT4 487 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 IQCKQ8N0W5 287 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ATP11CQ8NB49 1132 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 CPA5Q8WXQ8 436 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 HAS1Q92839 578 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 PURBQ96QR8 312 aaKnown RBP7.1□□□□□ -1.27
CSDE1-205ENST00000438362 OSBPL8Q9BZF1 889 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 TMEM117Q9H0C3 514 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 NOD2Q9HC29 1040 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 PPP1R9AQ9ULJ8 1098 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 SMG5Q9UPR3 1016 aaKnown RBP7.1□□□□□ -1.27
CSDE1-205ENST00000438362 PCDHA10Q9Y5I2 948 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 COMMD10Q9Y6G5 202 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 SPEF2Q9C093 1822 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 LRRC37A3O60309 1634 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 DIAPH2O60879 1101 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 OPHN1O60890 802 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 FSBPO95073 299 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 GZMAP12544 262 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 PSMC4P43686 418 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 CDR2Q01850 454 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 TFDP1Q14186 410 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ITIH4Q14624 930 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ATG16L1Q676U5 607 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 LMBRD2Q68DH5 695 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-205ENST00000438362 SWSAP1Q6NVH7 229 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 MXRA8Q9BRK3 442 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ADPGKQ9BRR6 497 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 GANQ9H2C0 597 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 KDM4CQ9H3R0 1056 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 SEMA4AQ9H3S1 761 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 TMEM8AQ9HCN3 771 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 PARVAQ9NVD7 372 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 AGO2Q9UKV8 859 aaKnown RBP7.1□□□□□ -1.27
CSDE1-205ENST00000438362 PCDHB2Q9Y5E7 798 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 USH1CQ9Y6N9 552 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 LMO7Q8WWI1 1683 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 A6NJR5 290 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 PI4K2BG5E9Z4 385 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 COPEO14579 308 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 MAP3K7O43318 606 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms