RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 ARSHQ5FYA8 562 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 NT5DC1Q5TFE4 455 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 GLB1LQ6UWU2 654 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 CABP7Q86V35 215 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 GSTCDQ8NEC7 633 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 MRPS27Q92552 414 aaKnown RBP9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 PABPC5Q96DU9 382 aaKnown RBP9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 CCDC51Q96ER9 411 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 USP28Q96RU2 1077 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 GAD1Q99259 594 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 APOL6Q9BWW8 343 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 MRPL9Q9BYD2 267 aaKnown RBP9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 GBP3Q9H0R5 595 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 PDZD7Q9H5P4 517 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 IGFLR1Q9H665 355 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 TLR9Q9NR96 1032 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 BLOC1S4Q9NUP1 217 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 SPG21Q9NZD8 308 aa9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
HERPUD2-206ENST00000438224 DENND4AQ7Z401 1863 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 ARL5CA6NH57 179 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PER2O15055 1255 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 STX6O43752 255 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 POMCP01189 267 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 NUDT7P0C024 238 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 SKIP12755 728 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 ITGA4P13612 1032 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 IL9P15248 144 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 LIG1P18858 919 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PLCG1P19174 1290 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 AKAP5P24588 427 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 GUCY2CP25092 1073 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 MLH1P40692 756 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 NPTX2P47972 431 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 SCNN1GP51170 649 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 CEBPZQ03701 1054 aaKnown RBP9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 DSC1Q08554 894 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 NR1H3Q13133 447 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 ADAM15Q13444 863 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PKP1Q13835 747 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 KARSQ15046 597 aaKnown RBP9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PCBP1Q15365 356 aaKnown RBP eCLIP9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 CLUL1Q15846 466 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 LEXMQ3ZCV2 418 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 SPECC1Q5M775 1068 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PLPP4Q5VZY2 271 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 SLC27A1Q6PCB7 646 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 RBM23Q86U06 439 aaKnown RBP9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 ZBTB8OSQ8IWT0 167 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 SYT2Q8N9I0 419 aaPredicted RBP9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 DEPTORQ8TB45 409 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 AUTS2Q8WXX7 1259 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 KIFAP3Q92845 792 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PGBD4Q96DM1 585 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 EPSTI1Q96J88 318 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PRIMPOLQ96LW4 560 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 CLIC6Q96NY7 704 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 CD320Q9NPF0 282 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 AAASQ9NRG9 546 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 PRMT7Q9NVM4 692 aaPredicted RBP9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 MARCH5Q9NX47 278 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 CLEC1BQ9P126 229 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 ARHGAP28Q9P2N2 729 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 CACNG4Q9UBN1 327 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 DNM3Q9UQ16 869 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 LZTS1Q9Y250 596 aa9.42□□□□□ -0.9
HERPUD2-206ENST00000438224 DOCK8Q8NF50 2099 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 A0A087X0B3 334 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 ABLIM1O14639 778 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 PTGESO14684 152 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 PLA2G4BP0C869 781 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 TCF3P15923 654 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 PPM1AP35813 382 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 PEX3P56589 373 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 PRPF4BQ13523 1007 aaKnown RBP9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 KCNC3Q14003 757 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 PPP2R5AQ15172 486 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 MAPK6Q16659 721 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 DUSP6Q16828 381 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 EP400NLQ6ZTU2 488 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 COLGALT2Q8IYK4 626 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 EFHBQ8N7U6 833 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 CEP120Q8N960 986 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 FEZF2Q8TBJ5 459 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 IGSF21Q96ID5 467 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 MSLNLQ96KJ4 702 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 UHRF1Q96T88 793 aaPredicted RBP9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 TCF25Q9BQ70 676 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 ZBP1Q9H171 429 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 C2orf40Q9H1Z8 148 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 KLK14Q9P0G3 267 aa9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 BARX2Q9UMQ3 279 aaPredicted RBP9.41□□□□□ -0.9
HERPUD2-206ENST00000438224 PHLPP2Q6ZVD8 1323 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 C2orf71A6NGG8 1288 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 CCDC169A6NNP5 214 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 ACKR2O00590 384 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms