RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SKIP12755 728 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 PMS2P54278 862 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 MORF4L2Q15014 288 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 ATG9AQ7Z3C6 839 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 TRIM59Q8IWR1 403 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 DHX40Q8IX18 779 aaKnown RBP16.79■□□□□ 0.28
PTPN13-204ENST00000436978 KRT82Q9NSB4 513 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 LCP1P13796 627 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 ANO4Q32M45 955 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 LRRC43Q8N309 656 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 TTC17Q96AE7 1141 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 CCSER1Q9C0I3 900 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.79■□□□□ 0.28
PTPN13-204ENST00000436978 EIF3DO15371 548 aaKnown RBP eCLIP16.79■□□□□ 0.28
PTPN13-204ENST00000436978 PRR29P0C7W0 189 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 CETPP11597 493 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 EEF1B2P24534 225 aaKnown RBP16.79■□□□□ 0.28
PTPN13-204ENST00000436978 TPI1P60174 286 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 STKLD1Q8NE28 680 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 DAGLAQ9Y4D2 1042 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 TBC1D19Q8N5T2 526 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 SYT2Q8N9I0 419 aaPredicted RBP16.79■□□□□ 0.28
PTPN13-204ENST00000436978 RAPGEF5Q92565 580 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 DHX35Q9H5Z1 703 aaKnown RBP16.79■□□□□ 0.28
PTPN13-204ENST00000436978 HNRNPCL2B2RXH8 293 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 HNRNPCL1O60812 293 aaKnown RBP16.79■□□□□ 0.28
PTPN13-204ENST00000436978 DNAJC6O75061 913 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 TADA2AO75478 443 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 ANP32DO95626 131 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 CHRNA5P30532 468 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
PTPN13-204ENST00000436978 RCOR2Q8IZ40 523 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 HEMGNQ9BXL5 484 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 HSPBP1Q9NZL4 362 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 LZICQ8WZA0 190 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 SCARF1Q14162 830 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 SZRD1Q7Z422 152 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 CHST13Q8NET6 341 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 SULT1E1P49888 294 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 CAPRIN1Q14444 709 aaKnown RBP16.78■□□□□ 0.28
PTPN13-204ENST00000436978 SV2CQ496J9 727 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
PTPN13-204ENST00000436978 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
PTPN13-204ENST00000436978 GPBP1L1Q9HC44 474 aaPredicted RBP16.78■□□□□ 0.28
PTPN13-204ENST00000436978 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
PTPN13-204ENST00000436978 CAPN11Q9UMQ6 739 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 ATP6V1E1P36543 226 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 DGKDQ16760 1214 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 AGPAT1Q99943 283 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 STK33Q9BYT3 514 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 BFARQ9NZS9 450 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 GOLGA8MH3BSY2 632 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 CLCN6P51797 869 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
PTPN13-204ENST00000436978 PRR5LQ6MZQ0 368 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 STAG2Q8N3U4 1231 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 PHF20Q9BVI0 1012 aa16.78■□□□□ 0.28
PTPN13-204ENST00000436978 KCNQ2O43526 872 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 RARBP10826 455 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 SLFNL1Q499Z3 407 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 SCOCQ9UIL1 159 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 CFLARO15519 480 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 CDH6P55285 790 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 PIGHQ14442 188 aaPredicted RBP16.77■□□□□ 0.28
PTPN13-204ENST00000436978 SGSM1Q2NKQ1 1148 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 RASIP1Q5U651 963 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 CCDC137Q6PK04 289 aaKnown RBP16.77■□□□□ 0.28
PTPN13-204ENST00000436978 IGSF9BQ9UPX0 1349 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 NOP14P78316 857 aaKnown RBP16.77■□□□□ 0.28
PTPN13-204ENST00000436978 TAF1DQ9H5J8 278 aaPredicted RBP16.77■□□□□ 0.28
PTPN13-204ENST00000436978 ABCB6Q9NP58 842 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 KIF17Q9P2E2 1029 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 APEX2Q9UBZ4 518 aa16.77■□□□□ 0.28
PTPN13-204ENST00000436978 ZNF70Q9UC06 446 aaPredicted RBP16.77■□□□□ 0.28
PTPN13-204ENST00000436978 CAMTA2O94983 1202 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 MYOZ2Q9NPC6 264 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 ZC3H4Q9UPT8 1303 aaKnown RBP16.77■□□□□ 0.27
PTPN13-204ENST00000436978 KIF28PB7ZC32 967 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 SPAG7O75391 227 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 KRT14P02533 472 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 NUGGCQ68CJ6 796 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 PBXIP1Q96AQ6 731 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 LBHD1Q9BQE6 289 aaPredicted RBP16.77■□□□□ 0.27
PTPN13-204ENST00000436978 P3H1Q32P28 736 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 TBC1D1Q86TI0 1168 aaPredicted RBP16.77■□□□□ 0.27
PTPN13-204ENST00000436978 DCUN1D1Q96GG9 259 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 SENP7Q9BQF6 1050 aa16.77■□□□□ 0.27
PTPN13-204ENST00000436978 DNAJC17Q9NVM6 304 aaKnown RBP16.77■□□□□ 0.27
PTPN13-204ENST00000436978 GJB4Q9NTQ9 266 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 GAS2O43903 313 aaKnown RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 ZNF157P51786 506 aaPredicted RBP16.76■□□□□ 0.27
PTPN13-204ENST00000436978 LINC00116Q8NCU8 138 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 ASPSCR1Q9BZE9 553 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 ACADSBP45954 432 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 GTF2H3Q13889 308 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 KIRREL3Q8IZU9 778 aa16.76■□□□□ 0.27
PTPN13-204ENST00000436978 C18orf8Q96DM3 657 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms