RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MCPH1Q8NEM0 835 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 ERMNQ8TAM6 284 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 SLC22A17Q8WUG5 538 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 CPB2Q96IY4 423 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 KLHL5Q96PQ7 755 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 EIF2AQ9BY44 585 aaKnown RBP8.6□□□□□ -1.03
VPS50-203ENST00000436177 NXF3Q9H4D5 531 aaKnown RBP8.6□□□□□ -1.03
VPS50-203ENST00000436177 PIDD1Q9HB75 910 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 MAN1C1Q9NR34 630 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
VPS50-203ENST00000436177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.6□□□□□ -1.03
VPS50-203ENST00000436177 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 GIT1Q9Y2X7 761 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 WDFY4Q6ZS81 3184 aa8.6□□□□□ -1.03
VPS50-203ENST00000436177 SF3B1O75533 1304 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS50-203ENST00000436177 ARHGEF35A5YM69 484 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 ZBTB39O15060 712 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 B4GALT3O60512 393 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 SLITRK3O94933 977 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 NPTXRO95502 500 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 PDGFBP01127 241 aaPredicted RBP8.59□□□□□ -1.03
VPS50-203ENST00000436177 LIG1P18858 919 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 MCM7P33993 719 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 NEK4P51957 841 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 MBTD1Q05BQ5 628 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 POU5F1BQ06416 359 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 SPIRE1Q08AE8 756 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 GRIK3Q13003 919 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 TDGQ13569 410 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 LIN9Q5TKA1 542 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 KANK3Q6NY19 840 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 SLC27A1Q6PCB7 646 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 CYP26C1Q6V0L0 522 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 APBB1IPQ7Z5R6 666 aaPredicted RBP8.59□□□□□ -1.03
VPS50-203ENST00000436177 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
VPS50-203ENST00000436177 FLCNQ8NFG4 579 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 CMASQ8NFW8 434 aaPredicted RBP8.59□□□□□ -1.03
VPS50-203ENST00000436177 DEPTORQ8TB45 409 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 ASAP3Q8TDY4 903 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 PIGOQ8TEQ8 1089 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 SMG7Q92540 1137 aaKnown RBP8.59□□□□□ -1.03
VPS50-203ENST00000436177 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 ADPGKQ9BRR6 497 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 VN1R3Q9BXE9 311 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 C2orf40Q9H1Z8 148 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 XPNPEP1Q9NQW7 623 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 FAM86C1Q9NVL1 165 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 HES2Q9Y543 173 aa8.59□□□□□ -1.03
VPS50-203ENST00000436177 CLUHO75153 1309 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 BTBD18B2RXH4 712 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 H0Y858 1186 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 INPPL1O15357 1258 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 TEX28O15482 410 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 B4GALT5O43286 388 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 DTNBO60941 627 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 TADA2AO75478 443 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 CTDNEP1O95476 244 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 ARF4P18085 180 aaPredicted RBP8.58□□□□□ -1.04
VPS50-203ENST00000436177 GLRA2P23416 452 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 RARRES1P49788 294 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 AFF1P51825 1210 aaKnown RBP8.58□□□□□ -1.04
VPS50-203ENST00000436177 DSG1Q02413 1049 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 TCF15Q12870 199 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 PPP2R5AQ15172 486 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 USP41Q3LFD5 358 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 EARS2Q5JPH6 523 aaKnown RBP8.58□□□□□ -1.04
VPS50-203ENST00000436177 HAUS3Q68CZ6 603 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 FUT10Q6P4F1 479 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 MAEAQ7L5Y9 396 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 COLGALT2Q8IYK4 626 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 RIN2Q8WYP3 895 aaPredicted RBP8.58□□□□□ -1.04
VPS50-203ENST00000436177 PRIMPOLQ96LW4 560 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 NACC1Q96RE7 527 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 HSD17B14Q9BPX1 270 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 NFKBIZQ9BYH8 718 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 PLEKHA4Q9H4M7 779 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 TUFT1Q9NNX1 390 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 PRMT7Q9NVM4 692 aaPredicted RBP8.58□□□□□ -1.04
VPS50-203ENST00000436177 IGSF9Q9P2J2 1179 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 ZMYM2Q9UBW7 1377 aa8.58□□□□□ -1.04
VPS50-203ENST00000436177 GVINP1Q7Z2Y8 2422 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 CCDC195A0A1B0GUA6 201 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 NRG2O14511 850 aaPredicted RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 N4BP3O15049 544 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 JAK2O60674 1132 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 OR52Z1P0C646 297 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 MYBP10242 640 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 XRCC6P12956 609 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS50-203ENST00000436177 AKAP5P24588 427 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 ARL2P36404 184 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 CLCN5P51795 746 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 DSC1Q08554 894 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 ELAVL2Q12926 359 aaKnown RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 ORC2Q13416 577 aaPredicted RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 PRPF4BQ13523 1007 aaKnown RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 HSP90AA2PQ14568 343 aaPredicted RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 MAPK6Q16659 721 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 ME3Q16798 604 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 PDXDC1Q6P996 788 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms