RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 ZSWIM2Q8NEG5 633 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 PARD3BQ8TEW8 1205 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 VTI1AQ96AJ9 217 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 ZBTB45Q96K62 511 aaPredicted RBP12.32□□□□□ -0.44
PCOTH-203ENST00000435039 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 NUP58Q9BVL2 599 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 CELF4Q9BZC1 486 aaKnown RBP12.32□□□□□ -0.44
PCOTH-203ENST00000435039 TTYH3Q9C0H2 523 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 RBAKQ9NYW8 714 aaPredicted RBP12.32□□□□□ -0.44
PCOTH-203ENST00000435039 NOD1Q9Y239 953 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 USP20Q9Y2K6 914 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 DAAM1Q9Y4D1 1078 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 CDY2AQ9Y6F7 541 aa12.32□□□□□ -0.44
PCOTH-203ENST00000435039 A0A1B0GUA9 196 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 A0A1W2PQJ5 194 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 LRRIQ3A6PVS8 624 aaPredicted RBP12.31□□□□□ -0.44
PCOTH-203ENST00000435039 ARVCFO00192 962 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 HARSP12081 509 aaKnown RBP12.31□□□□□ -0.44
PCOTH-203ENST00000435039 TRIM21P19474 475 aaKnown RBP12.31□□□□□ -0.44
PCOTH-203ENST00000435039 CLDN10P78369 228 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 RBL2Q08999 1139 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 SURF1Q15526 300 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 PTPN21Q16825 1174 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 EXOC3L4Q17RC7 722 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 TRIM71Q2Q1W2 868 aaKnown RBP12.31□□□□□ -0.44
PCOTH-203ENST00000435039 C1orf220Q5T0J3 134 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
PCOTH-203ENST00000435039 GBP6Q6ZN66 633 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 RDH13Q8NBN7 331 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 TMEM40Q8WWA1 233 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 WNT8BQ93098 351 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 CGRRF1Q99675 332 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 TCHPQ9BT92 498 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 PLCB1Q9NQ66 1216 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 GCNT4Q9P109 453 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 CPSF3Q9UKF6 684 aaKnown RBP12.31□□□□□ -0.44
PCOTH-203ENST00000435039 GINS2Q9Y248 185 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
PCOTH-203ENST00000435039 CITO14578 2027 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 PDCD11Q14690 1871 aaKnown RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 SOX1O00570 391 aaPredicted RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 NRDCO43847 1150 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 B4GALT4O60513 344 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CSDE1O75534 798 aaKnown RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 RFX1P22670 979 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 ACOT2P49753 483 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CETN1Q12798 172 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CBWD6Q4V339 395 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CBWD3Q5JTY5 395 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 FAM26DQ5JW98 314 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CBWD5Q5RIA9 395 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 SLC27A1Q6PCB7 646 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CCDC155Q8N6L0 562 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 NEK11Q8NG66 645 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CAGE1Q8TC20 777 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 DHX38Q92620 1227 aaKnown RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CPB2Q96IY4 423 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 FNBP1Q96RU3 617 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 TMEM8AQ9HCN3 771 aa12.3□□□□□ -0.44
PCOTH-203ENST00000435039 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
PCOTH-203ENST00000435039 IL18RAPO95256 599 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 CLTAP09496 248 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 CTSHP09668 335 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 FGFR4P22455 802 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 HOXA11P31270 313 aaPredicted RBP12.29□□□□□ -0.44
PCOTH-203ENST00000435039 THPOP40225 353 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 GRM5P41594 1212 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 KLK7P49862 253 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 AP3M2P53677 418 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 DLG4P78352 724 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 PPP3CAQ08209 521 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 KCNMA1Q12791 1236 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 ARID5BQ14865 1188 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 KRT39Q6A163 491 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 WDR49Q8IV35 697 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 C7orf61Q8IZ16 206 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 TC2NQ8N9U0 490 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 CCDC127Q96BQ5 260 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 PANX2Q96RD6 677 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 GANQ9H2C0 597 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 CEP72Q9P209 647 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 FBXL5Q9UKA1 691 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 CAPN11Q9UMQ6 739 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
PCOTH-203ENST00000435039 SQORQ9Y6N5 450 aa12.29□□□□□ -0.44
PCOTH-203ENST00000435039 A0A0C4DFX4 3053 aa12.28□□□□□ -0.44
PCOTH-203ENST00000435039 TTC26A0AVF1 554 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms