RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 THP07101 528 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 PRKCQQ04759 706 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 ZNF658Q5TYW1 1059 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 ARL6IP4Q66PJ3 421 aaKnown RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 TTC19Q6DKK2 380 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 DDI1Q8WTU0 396 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 MRPL9Q9BYD2 267 aaKnown RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 PPP2R5EQ16537 467 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 SPATA1Q5VX52 437 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 RMDN2Q96LZ7 410 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 KANSL3Q9P2N6 904 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 SLC13A4Q9UKG4 626 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 STMN1P16949 149 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 NMT1P30419 496 aaKnown RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 COPB1P53618 953 aaKnown RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 XRRA1Q6P2D8 792 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 FBXO32Q969P5 355 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 PABPC5Q96DU9 382 aaKnown RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 PPP6R2O75170 966 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 GPC4O75487 556 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 ATP6V1E1P36543 226 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 ALX1Q15699 326 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 DBN1Q16643 649 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 PPP2R2DQ66LE6 453 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 CAMKK2Q96RR4 588 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 NFKBIZQ9BYH8 718 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 DPH5Q9H2P9 285 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 CBX8Q9HC52 389 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 VTA1Q9NP79 307 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 FANCLQ9NW38 375 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 FBXO10Q9UK96 956 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 NFIBO00712 420 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 STX2P32856 288 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 RD3Q7Z3Z2 195 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 TUFT1Q9NNX1 390 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 TMX2Q9Y320 296 aa12.92□□□□□ -0.34
UBE3B-203ENST00000434735 SRPRBQ9Y5M8 271 aaKnown RBP12.92□□□□□ -0.34
UBE3B-203ENST00000434735 IRS2Q9Y4H2 1338 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 LZTS3O60299 673 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 PCDH8O95206 1070 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 SLFN14P0C7P3 912 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 ELAVL2Q12926 359 aaKnown RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 COASYQ13057 564 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 UHMK1Q8TAS1 419 aaKnown RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 TLK1Q9UKI8 766 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 UBA6A0AVT1 1052 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 SLC15A5A6NIM6 579 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 PP2D1A8MPX8 630 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 SYF2O95926 243 aaKnown RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 AP1B1Q10567 949 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 KRT71Q3SY84 523 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 MRPL17Q9NRX2 175 aaKnown RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 PCDHB9Q9Y5E1 797 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 CFAP69A5D8W1 941 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 FGFR4P22455 802 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 GNL1P36915 607 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 RASSF2P50749 326 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 HSD17B4P51659 736 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 GTF2A1P52655 376 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 TLE6Q9H808 572 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 CROCC2H7BZ55 1655 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 NPHP3-ACAD11A0A0J9YXS1 232 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 KIAA1683Q9H0B3 1180 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 AKAP7Q9P0M2 348 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-203ENST00000434735 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
UBE3B-203ENST00000434735 VWA5AO00534 786 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 PPP1R12AO14974 1030 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 CNTN2Q02246 1040 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 UBQLN1Q9UMX0 589 aaKnown RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 G3BP2Q9UN86 482 aaKnown RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 PRPF4O43172 522 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 AP3M2P53677 418 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 KRT39Q6A163 491 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 EGFL8Q99944 293 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 ADAM2Q99965 735 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 INSRRP14616 1297 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 MAPK9P45984 424 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 RPL10AP62906 217 aaKnown RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 CARNMT1Q8N4J0 409 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 ANKRD42Q8N9B4 389 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 TSC1Q92574 1164 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 TYW1Q9NV66 732 aaKnown RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 EIF3CLB5ME19 914 aaKnown RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 RGS16O15492 202 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 EYA4O95677 639 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 PAMP19021 973 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 CDC27P30260 824 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 HTRA3P83110 453 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 EHHADHQ08426 723 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms